Mannheimia varigena USDA-ARS-USMARC-1312: X874_19320
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Entry
X874_19320 CDS
T03028
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg00300
Lysine biosynthesis
mvg00470
D-Amino acid metabolism
mvg01100
Metabolic pathways
mvg01110
Biosynthesis of secondary metabolites
mvg01120
Microbial metabolism in diverse environments
mvg01230
Biosynthesis of amino acids
Module
mvg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
X874_19320
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
X874_19320
Enzymes [BR:
mvg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
X874_19320
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHG78565
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Position
2063816..2065066
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AA seq
416 aa
AA seq
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MNHFEYKNNQLFAEGVAIADIIAEYGTPAYIYSRATLERHWHAFDNAFGSHPHLVCFAVK
SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGDPAKVVFSGVAKSHTEIQRALEVGIR
CFNIESISELHRINEVAGKLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE
VYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLREDGIELHHLDLGGGL
GVPYNGEEPPHPTEYAKALLEKLKGYENLEIIIEPGRAITANAGILVTKVEYLKQSEDRN
FAIVDTGMNDMIRPALYEAYMQITEVDKTLSREKAVYDVVGPICETSDFLGKQRELAVAE
GDLIAMRSAGAYGAAMSSTYNSRPQAAEIMVDGNQAHLIKARATFADLWRLEKLLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaccattttgaatataaaaacaaccaactttttgcggaaggtgtagcgattgccgac
atcatcgctgaatacggcacgccggcttacatctactctcgagccaccctcgaacgccat
tggcacgcttttgacaacgcttttggctcacaccctcatttagtctgctttgcggtgaaa
tcaaactcaaatatcgccttattgaacgtgatggctcgcctcggttcaggctttgatatt
gtgtcgcaaggcgaattggagcgtgtgcttgccgctgggggcgatcctgccaaagtggtt
ttctccggcgtggcaaaatcgcacaccgaaattcaacgtgcgttagaagtggggattcgc
tgctttaatatcgaatccatttccgagcttcaccgcatcaacgaagttgccggcaaatta
ggcaaaatcgccccgatttccctgcgtgtaaacccagatgtggacgctcatactcaccct
tatatctcaactggactaaaagagaacaaattcggcgtgagcgtgacccaagctcgtgaa
gtgtatcgtttagcgaaaaccttaccaaacgtgaaaattaccggaatggattgccacatc
ggctcgcaattaaccgaattgcagcctttcttagatgccaccgaccgtttgattgtgcta
atggaacagctgcgtgaagatggcattgagctgcaccaccttgatttaggcggcggctta
ggtgtgccttacaacggcgaagagcctcctcacccaaccgaatacgctaaagcgttgttg
gaaaaactgaaaggttacgaaaaccttgaaatcatcatcgaaccggggcgtgcaattacc
gcaaacgccggtattttggtgactaaagtggaatatttaaaacagagcgaagaccgcaat
tttgcgattgtcgataccggaatgaacgatatgattcgccctgcactttacgaagcctat
atgcaaattaccgaagtggataaaaccttaagccgtgaaaaagcggtttacgatgtggtc
ggtccgatctgcgaaacttccgatttcttaggcaaacagcgtgaactcgctgtcgccgag
ggggatttaatcgcaatgcgttcggcaggggcttacggtgcggcaatgtcttccacctac
aactctcgcccacaagcagcggaaattatggtggacggtaaccaagctcacttaatcaaa
gcccgagcaacctttgccgatttatggcgtttagaaaaattattaccttaa
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