Mannheimia varigena USDA-ARS-USMARC-1312: X874_19640
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Entry
X874_19640 CDS
T03028
Name
(GenBank) Selenocysteine-specific elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mvg03012
]
X874_19640
Translation factors [BR:
mvg03012
]
Eukaryotic type
Elongation factors
X874_19640
Prokaryotic type
X874_19640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
WHD_2nd_SelB_bact
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
SRPRB
FeoB_N
PduV-EutP
HrcA
Peptidase_M60_C
GTP_EFTU_D4
MMR_HSR1_Xtn
Cytochrom_B559a
Motif
Other DBs
NCBI-ProteinID:
AHG78597
LinkDB
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Position
complement(2102033..2103880)
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AA seq
615 aa
AA seq
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MIICTAGHVDHGKTSLLHALTGTDTTHLPEEQKRGLTIDLGYAYLPIENDILGFIDVPGH
QRFLSNMLAGLGGINHALLVISVEEGIKPQTEEHLDILRLLNFQHIMVVITKADRVEAEQ
ISALIEKVKTTYPFLVEAKTFVTSAKTSQGIEELKAHLIQLNQQNPQINKPFRYAIDRVF
NVKGAGLVVTGTTVSGKVAVGSELFLSNGKKVRVKAIHAQNSPSEIGVAGQRLALNIANV
EKEEIQRSDWITELEPKFATDRITVALTANQTFKENCVVHFYHFASHITGKLNLLEAKQA
VKNQQFFAEVILDEPLHIAVGDKIILRSGDDSQTLAGAEVLEIHSPKRHKRTDERLALVK
NLAKTTACNDFAARVKCVLENKAAALDFLLWAEQCFANDVAALGFDTSSKWVFNASFKTE
AQQRVMAKIAEYHQQHQDQIGVTKARLYRIALLDLPELLAYQFIDDLVEQKQLTNSRGWL
HLPEHRIEFTATELQLWQQIRPLFEATNQALWVRDVASSLSVDETEMRNLLYKAGKLGYL
IPIVKDRFLLSEQIAEFAVLIKDFVAEHGSISVNQLRDQLNYGRKLTVQLIEYFDRSGFL
RRKGDVHLLRDRETF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgattatctgcaccgccggtcatgtcgatcacggcaaaacctcgcttttacacgcctta
accggcacggataccacccatttgcccgaagagcaaaaacgagggctgaccattgatttg
ggctacgcttatttaccgattgagaacgatattttaggcttcattgatgtgccggggcat
caacggtttttatcgaatatgttggcaggcttgggcggcattaaccacgctttgttggtg
atttctgtcgaagagggcattaaaccgcaaaccgaagagcatctggatattctgcgcttg
ctgaattttcaacacattatggtggtgattaccaaagccgatcgtgttgaagccgagcaa
atttctgcattaatcgaaaaggtgaaaacgacttatccgttcttggtggaggcgaaaacc
tttgtgacctctgctaaaacctcgcaaggtattgaggagctgaaagcccacttaattcaa
ctcaatcagcaaaatccgcaaatcaataaaccgttccgttatgcgattgaccgtgtattt
aatgtaaaaggggctggcttggtggttacgggaacaacggtttcaggcaaggtagcggtg
ggttcggagctgtttttatccaacggcaaaaaagtgcgagtgaaagcgattcacgctcaa
aattcgccgtctgaaatcggtgtggcaggtcagcgtttggcgttgaatattgcgaatgtg
gaaaaagaggagattcagcgtagcgattggatcaccgagcttgagccgaaattcgccacc
gaccgcattaccgttgccctcactgccaaccaaacctttaaagaaaactgcgtggtgcat
ttttaccacttcgcttcgcacattaccggcaaactcaatttgctcgaggcgaaacaagcg
gtcaaaaatcagcaattttttgcagaagtgattttagacgagccgctgcacattgcggtg
ggcgacaaaatcattttacgcagcggcgatgacagccaaactttagccggggcggaagtg
ttggaaatccactcgccgaaacgtcataaacgcactgacgagcgtttggcgttggtaaaa
aatctggcaaaaacgaccgcttgcaacgattttgccgctcgggtcaaatgcgttttagag
aataaagcggcggcgttggatttcctcttatgggcggaacaatgttttgccaacgatgtg
gcggcgttgggtttcgacacttcttcaaaatgggtatttaatgcgagttttaaaaccgaa
gctcagcagcgtgtgatggcgaaaatcgccgaatatcatcagcaacatcaagaccaaatt
ggggtgacgaaagcccgcctgtatcgcattgcgttgttagatttgccggagctgttggcg
tatcaatttattgatgatttggttgagcaaaaacagttaaccaacagccgtggctggcta
catttacccgagcatcgcattgaatttactgcaaccgaattgcaactttggcaacaaatt
cgaccgcttttcgaggcaactaaccaagccctttgggtgcgtgatgtggcaagttcgctc
tcggttgatgaaaccgaaatgcggaatttgctctacaaggcaggcaagctcggctatttg
attccgattgtgaaagaccgattcttgttgagcgaacagatcgctgaatttgcagtattg
attaaagattttgtggcggaacacggtagtatttcggtgaaccagctacgagatcaactc
aattatggacgaaaactcacggtgcagttgattgaatatttcgaccgttcgggcttttta
agacgcaaaggcgatgtgcatttactgagggatagggagacgttttaa
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