Mannheimia varigena USDA-ARS-USMARC-1312: X874_2220
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Entry
X874_2220 CDS
T03028
Name
(GenBank) Nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvg03000
]
X874_2220
03036 Chromosome and associated proteins [BR:
mvg03036
]
X874_2220
Transcription factors [BR:
mvg03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
X874_2220
Chromosome and associated proteins [BR:
mvg03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
X874_2220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TFCD_C
DUF3404
Motif
Other DBs
NCBI-ProteinID:
AHG76860
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All DBs
Position
complement(238871..239455)
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AA seq
194 aa
AA seq
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MPKKSVVERRQQVLEVLIGLLNSEDGMQRVTTERLAAAVGVSEGALYRYFPSKTKMFEAL
IEKIEQTLTSYIHANKRQDSSANSVRAILYTILEFARKNPGVTRILTGHALMFEENMLKA
RVAKFFDNLELQFANILQLSKLRERKSFEDERALAGYLVNFCEGQFLRLVRSNFSYNQHQ
HFEKQWAFIKPLFD
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaatccgtggtggaacgccgccaacaggtgttggaagttttaattggctta
ttaaattctgaagatggaatgcagcgtgtaaccaccgagcgtttagcagcggcagtgggg
gtatcggaaggagcgttatatcgctattttccaagcaaaacaaaaatgtttgaagcactc
atagagaaaattgagcaaacacttaccagctatattcacgccaataaacgccaagatagc
agtgcaaattcagtacgagccattctttatactattttagaatttgctcgtaaaaatccg
ggcgtaacccgtattctgacaggacacgccttaatgtttgaagagaatatgctgaaagct
cgtgtcgccaaattctttgataatttggaattacaatttgccaatatcttacaacttagc
aaattacgtgaacgcaaatcctttgaagatgagcgtgcattggcgggttatttggtaaat
ttttgcgaagggcaatttttacgtcttgttcgctcaaatttcagctataaccagcatcaa
cattttgaaaaacagtgggcatttatcaagcctttatttgattga
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