Mannheimia varigena USDA-ARS-USMARC-1312: X874_3620
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Entry
X874_3620 CDS
T03028
Name
(GenBank) D-ribose-binding periplasmic protein
KO
K10439
ribose transport system substrate-binding protein
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg02010
ABC transporters
mvg02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
X874_3620
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
X874_3620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvg02000
]
X874_3620
Transporters [BR:
mvg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
X874_3620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
PucR
Motif
Other DBs
NCBI-ProteinID:
AHG77000
LinkDB
All DBs
Position
385356..386234
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AA seq
292 aa
AA seq
DB search
MKKLTTLASAIMLSFSVAATASAKETIALAVSTLDNPFFVSLKDGAQKKADELGYKLVVL
DSQNDPAKELSNVEDLTVRGAKVLLINPTDSEAVGNAVAIANRNKIPVITLDRGAAKGDV
VSHIASDNVAGGKMAGDFIAQKLGAGAKVIQLEGIAGTSAARERGEGFKQAIDAHKFNVL
ASQPADFDRTKGLNVTENLLASKGDVQAIFAQNDEMALGALRAVGAAKKDVLIVGFDGTD
DGVKAVKGGKLAATIAQQPDLIGSLGVETADKVLKGEKVEAKIPVDLKVIAK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactaacgactttagcttcagcaattatgttaagtttctctgtagcggcaact
gcttcagcgaaagagaccattgccttagcagtatctactttagacaacccattcttcgtg
agccttaaagatggtgctcaaaagaaagcggatgaattaggctacaaattagtggtgctt
gattcacaaaatgacccggcaaaagagctttctaacgtggaagacttgaccgtgcgtggg
gcgaaagtgcttttaattaacccaacggattcggaagcggtcggaaatgcagtggcaatt
gcaaatcgcaacaaaattccggtaatcacccttgaccgtggtgcagcgaaaggtgatgtg
gtaagccatatcgcttcagacaacgtagccggcggtaaaatggctggtgatttcatcgca
caaaaattaggtgcaggggcaaaagtgatccaattagaagggattgctggtacatcagcg
gctcgtgaacgtggcgaaggtttcaaacaagcgattgacgctcacaaattcaacgtactt
gccagccagccggcagactttgaccgcaccaaaggcttaaacgtaacggaaaacttatta
gccagcaaaggcgatgtacaagcgatttttgctcaaaacgatgaaatggcattaggtgca
ttgcgtgccgtgggtgctgcgaagaaagatgtattaatcgttggctttgacggtacagat
gacggcgtgaaagcggttaaaggcggcaaattagcggcaacgattgctcaacaaccggac
ttaatcggctcacttggcgtggaaaccgctgacaaagtgttaaaaggcgaaaaagtcgaa
gcgaaaatcccagtggatttaaaagttatcgcaaaataa
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