Mannheimia varigena USDA-ARS-USMARC-1312: X874_4290
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Entry
X874_4290 CDS
T03028
Name
(GenBank) Periplasmic oligopeptide-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg01501
beta-Lactam resistance
mvg02010
ABC transporters
mvg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
X874_4290
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X874_4290
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
X874_4290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvg02000
]
X874_4290
Transporters [BR:
mvg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
X874_4290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Tctex-1
Motif
Other DBs
NCBI-ProteinID:
AHG77065
LinkDB
All DBs
Position
460504..462138
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AA seq
544 aa
AA seq
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MQSKFPLSVLTASLVLGLSANVFAAKVPEGTTLAEKQDITINNGAEPSSFDPHKIEGVPE
SQVAYQLFEGLVTKDSDGNLQPGVAESWESTPDYKMWTFKLRKDAKWSNGEPVTAHDFVF
SWQRLVSPLTASPYSSYLTYLNVENAQDIIDGKKKPEELAVKAVDDHTFQVQLSQPVPYA
AELVTHSSLLPVNKNVVDKYGDAWVKKGNLVGNGAYVLADHVINEKIVFERNKNYWNDKE
SVINKATFLAIPNATTDVARYRAGDLDMTNYAIPPEQFPTLKKEIPNEVFTAKTLSTYYY
EFNHKRAPFDNVKVREALNLALDRTIITDKVLGQGQTPTYVFTPTYIHEGEKIQQPAYST
ESMADRKAKALKLLEEAGYSKSNPLKFTVLYNTNDNHKKIAIAVSSLWKQGTDGIVDVKL
ENQEWKTFLDTRRNANYDVSRAGWSGDYNQATTFVNYFLSNSSNNTAFYKSQAYDDAVAE
SYKVTDATGRTAAYAKAEEQLAKDFAIMPIYNYVNPRLVKPYVKGYEGKDPQDDILLRNL
YIVK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaaattccctctttccgtattaacagcttcattagtgttaggtttgtcggca
aatgtatttgcagcaaaagtaccagaaggcacaacacttgcagagaagcaagatattact
attaacaatggggctgaaccatcaagttttgatccgcataaaattgagggagtaccagaa
tctcaagtagcttatcagttatttgaaggcttagtaactaaggattcagacggtaatctc
caaccaggtgtggcggagtcttgggaaagcacgccagattacaaaatgtggacatttaaa
ttacgtaaagatgctaaatggtctaacggcgagccggtaactgctcacgatttcgtcttt
tcttggcagcgtttagtaagtccactcactgcttcgccttactcaagctacttaacttac
ctcaatgtagaaaacgctcaagatattattgacggcaagaaaaaaccagaagaattggcg
gtgaaagctgttgatgatcacactttccaagtgcaattaagtcagccagttccttatgcg
gcggagcttgttacgcactcatcattattaccagtaaataaaaatgttgttgacaaatac
ggcgatgcgtgggtgaaaaaaggtaatttagtgggtaatggtgcttatgttttagcagat
cacgttattaatgagaaaatcgtatttgaacgcaataaaaattattggaatgataaagaa
agcgtgattaataaagcgactttcttagcaattcctaatgcgacaactgatgtggctcgt
tatcgtgcaggtgatttggatatgacaaactatgctattccgccagagcagttcccaacg
cttaaaaaagaaattccaaatgaagtatttacagcaaaaacactttcaacttattactac
gagttcaaccacaaacgtgctccgtttgataatgtaaaagtacgtgaagcgttaaactta
gcattagaccgtactatcattacagataaagtattaggtcaaggacaaaccccaacttat
gtgtttacaccaacctatattcacgaaggggaaaaaatccagcaaccagcttactcaaca
gaatcgatggcggatagaaaagccaaagcattaaaattgttagaagaagcgggctatagc
aaatcaaatccgcttaaatttaccgtgctttataatactaacgataaccacaagaaaatt
gcaatcgcagtatcttctttatggaaacaaggcaccgacggcattgtagatgtgaaatta
gaaaatcaagagtggaaaaccttcttagatactcgtcgtaatgcaaactacgatgtatct
cgtgcaggttggtctggcgattataaccaagcaacgactttcgtgaactattttttatca
aattcaagtaacaatactgcattctataaaagccaggcgtatgatgatgcagtggctgag
tcttacaaagtaactgatgcaactggtcgaacagctgcttatgcgaaagcagaagagcag
ttagctaaagattttgcgattatgccgatttacaactatgtaaatccacgcttagtgaaa
ccttacgtgaaaggctatgaaggaaaagatccacaagatgatattttgcttcgtaactta
tacatcgtgaaataa
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