Mannheimia varigena USDA-ARS-USMARC-1312: X874_5470
Help
Entry
X874_5470 CDS
T03028
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg00260
Glycine, serine and threonine metabolism
mvg00460
Cyanoamino acid metabolism
mvg00630
Glyoxylate and dicarboxylate metabolism
mvg00670
One carbon pool by folate
mvg00680
Methane metabolism
mvg01100
Metabolic pathways
mvg01110
Biosynthesis of secondary metabolites
mvg01120
Microbial metabolism in diverse environments
mvg01200
Carbon metabolism
mvg01230
Biosynthesis of amino acids
mvg01240
Biosynthesis of cofactors
mvg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
X874_5470
09102 Energy metabolism
00680 Methane metabolism
X874_5470
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
X874_5470
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
X874_5470
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
X874_5470
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
X874_5470
Enzymes [BR:
mvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
X874_5470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Cys_Met_Meta_PP
Phage_capsid
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AHG77183
LinkDB
All DBs
Position
580868..582130
Genome browser
AA seq
420 aa
AA seq
DB search
MLKRDMNIADYDAVLWQAIQDEDRRQEEHIELIASENYASPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANAAVYMALLNPGDTILGMS
LAHGGHLTHGASVSFSGKIYKAEQYGITAEGLIDYDALRKQAQEVKPKMIVAGFSAYSQV
IDWAKVREIADEVGAYLFVDMAHVAGLIAAGVYPNPLPHAHVVTTTTHKTLAGPRGGLIL
SACGDEEIYKKLQSAVFPAGQGGPLMHVIAAKAVCFKEALEPEFKAYQQQVVKNAKAMVE
VFKQRGFEVVSNGTENHLFLVSFVKQGLTGKAADAALGAANITVNKNSVPNDPQKPFVTS
GIRVGTPSVTRRGFKEADVTALAGWMCDVLESIGKDNHEQVIAETKAKVLDICKRLPVYA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacgtgatatgaatatcgcagattatgatgctgttttatggcaggctatccaa
gatgaagatcgtcgccaagaagaacatattgagttaattgcatcagaaaattatgcaagc
ccacgtgtaatgcaagctcaaggttcacaattgacaaataaatatgctgagggatatcca
ggtaaacgttattatggcggttgtgagtatgtggatattgttgaacaattagctattgat
cgtgctaaagagctatttggtgctgattatgctaatgtgcagccgcactctggctcgcaa
gcaaatgccgcagtatatatggcgttattaaatccgggcgatacgattttaggaatgagt
ttggctcacggtgggcatttaacacacggtgcttcagtcagtttttccggcaaaatctat
aaagcggagcaatatggtattaccgcagaaggcttaattgattacgatgcattgcgtaag
caagctcaagaagttaagccaaaaatgattgtggctggtttctctgcttattctcaagtg
attgattgggcaaaagtgcgtgaaattgctgatgaagtaggtgcttacttatttgtggat
atggcacacgttgcaggtttaatcgcagctggagtttacccaaatccacttccacacgca
cacgttgttacaactacaacacataaaacattagccggtcctcgcggtggtttaatttta
tctgcttgtggcgatgaagaaatctataaaaaactacagtctgcggtattcccagcaggt
caaggtggtccgttaatgcacgttattgcagcaaaagcggtttgctttaaagaagcatta
gagcctgaatttaaagcctaccaacaacaagtggtaaaaaatgcaaaagcaatggtggaa
gtatttaaacaacgtggctttgaagttgtttctaacggaacggaaaatcatttattccta
gtaagttttgtaaaacaaggcttaactggtaaagcggcagatgcagctttaggtgcagca
aatatcacggtaaataaaaactcagtaccaaacgatccacaaaaaccatttgtaacatca
ggtatccgtgtaggtacaccatctgttacccgtcgtggctttaaagaagcagacgtaacc
gcactagccggttggatgtgtgatgtattggaaagtatcggtaaagacaatcacgaacaa
gtgattgcagagacgaaagcgaaagtattagatatctgtaaacgtttaccagtttacgca
taa
DBGET
integrated database retrieval system
