Mannheimia varigena USDA-ARS-USMARC-1312: X874_6280
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Entry
X874_6280 CDS
T03028
Name
(GenBank) Penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg00550
Peptidoglycan biosynthesis
mvg01100
Metabolic pathways
mvg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
X874_6280
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
X874_6280
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mvg01003
]
X874_6280
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mvg01011
]
X874_6280
Enzymes [BR:
mvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
X874_6280
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
X874_6280
Glycosyltransferases [BR:
mvg01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
X874_6280
Peptidoglycan biosynthesis and degradation proteins [BR:
mvg01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
X874_6280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AHG77264
LinkDB
All DBs
Position
659599..662151
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AA seq
850 aa
AA seq
DB search
MRIAKIIFSALFSLLILGGVIGGLLYMHIKSDLPDVATLKNVELQQPMQIFTLDGKLIGE
VGEERRIPVKLEDVPPMLVKAILATEDARFYEHKGIDPKGIMRAVWRTSQGDTQGASTIT
QQLAKNFFLTPERSIERKAKEAILALEIEQVLTKNEILELYLNKIYLGYRSHGVAAAAKT
YFNKSLKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAEDRRNVVLGRMLETKDITQKEYEK
AKAEPVVANYYGATLEFRADYVTEMVRQEIVKRYGENIAYNKGLKVYATVLSHDQKAAQD
ALRENLIDYDRRRGWRGADKLWTGSSVWDDEKIIEHLSKLPKSDPFTPAVVMQTDKSKYT
ILLANGEPATLKRVNASFAPKGLKVGEQIWVRLNKAKEWTLGQVPEVNSALVSINSENGA
IEAIVGGFSFEQSRFNRATQSLVQVGSAIKPFIYAAAMNKGLSLSTTISDGPIVIKKKGQ
KEWRPKNADGVYGGPTRARVALGKSRNMVAIRVLQMAGIDYTADYLQRFGFNRNQYIATE
SLALGAASFTPLEMARAYAVFNNGGYLIEPYIIDRIIDAQGYELYQANPVVSCSVCDNPV
IYPEPKYFDSVKIHDETQVATTPVTQNSTEEEVVEDIVESEPELQAENSEKNAPSLMAES
SHHVKGLRYAPHVISNELAFLMRSALATAVTGEPEYGWRGTSYRMLNTIKRADVGGKTGT
TNNSKATWYAGFGADIATVVYVGFDDNKRELGKGASGSVTALPAWVNYMKVALADKPVQK
DVVPGNIVEVKIDPNSGFLGNGRKEFFIKGTEPTKRYVVERGYTEKSPTQTVPARLGLPP
PGVLQSGELF
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgcaaaaataatatttagtgctttattttcacttttaattttaggtggggta
attggcggtttactttatatgcatatcaagtctgatttgcctgatgtagcaactctaaaa
aatgttgagctacaacagccaatgcagatttttaccctagatggtaaattaattggtgag
gtaggtgaagaacgccgtatccctgttaaacttgaagatgttcctccaatgctagtaaaa
gcgattttggcaacagaagatgctcgtttttatgaacataaagggattgatcctaaaggc
attatgcgtgcagtatggcgtactagtcagggcgatacacaaggggcaagtactattacg
caacagctagcgaaaaactttttcttaactcctgaacgtagcattgagcgcaaagccaaa
gaggcaattctcgcattagaaattgagcaagttttgacgaaaaacgaaattttagaactt
tatttaaataaaatttatttaggctaccgctctcatggtgttgcagcagcggctaaaacc
tattttaataaatcgctaaaggatctgacactttcggaaattgcgattattgcggggcta
ccaaaagcaccatcaacgatgaatccgctttattcagtaaaacgagcagaagatcggcgt
aatgtggtattaggtcggatgctcgaaaccaaagatattactcaaaaagaatatgaaaaa
gcgaaagctgaaccagttgttgctaattattatggagcaactttagagttccgtgctgat
tatgtaactgagatggttcgccaagaaatagttaaacgctatggtgaaaatattgcttat
aacaaaggcttgaaagtttatgcaactgtgctttcacatgatcagaaagcagcacaagat
gcattgcgtgaaaacctgattgattatgaccgccgtcgtggttggcgaggggctgacaag
ctatggacgggtagctcagtttgggacgatgagaaaatcatcgagcatttaagtaaattg
ccaaaatctgatccctttacccctgctgttgttatgcaaacagataaatcaaaatatacg
attttattagcaaatggggagcctgcaacattaaaacgtgttaatgcgtcttttgcgcct
aaagggttaaaggttggagaacagatttgggttagactaaataaagccaaggagtggact
ttaggacaagtgcctgaagttaattcagcgttagtgtcaattaatagtgaaaatggggct
attgaagctattgtgggtggttttagctttgaacagagccgctttaaccgtgctactcaa
tctttagtacaagtaggttcggcgattaagccttttatttatgccgcagctatgaataag
ggattaagtctttctaccactattagtgatggcccaattgtgattaaaaagaaagggcaa
aaagagtggcgacctaaaaatgcggacggtgtttatggcggcccaacgcgtgcaagagta
gcattaggtaaatccagaaatatggtcgcaattcgtgtattgcaaatggcgggcatcgat
tatactgctgattatttacaacgttttggctttaatcgtaaccagtatatcgccacggaa
tcacttgcgttaggagcggcttcattcactccgcttgaaatggctcgagcatatgcggta
tttaataatggtggttatttaattgaaccttatattattgaccgaattattgatgcccaa
ggctatgagctgtatcaagcaaatcctgtagtatcttgttcagtgtgcgataatcctgtg
atttatcctgagccgaaatattttgactcagtaaaaattcatgatgaaactcaagtagcg
acaactccagttactcagaatagtactgaggaagaagtagtggaggatatcgtagaatca
gagccagaattacaagcagaaaatagtgagaaaaatgctcctagcttgatggcagagtct
tcccatcatgttaagggactacgttatgctcctcatgtgataagtaatgaattagcattc
ttaatgcgtagtgcattagctactgctgtgactggtgagccagaatatggttggcgcggc
acaagttaccgaatgcttaatacaattaagcgggctgatgtgggcggtaaaacaggtaca
acaaataattctaaagcaacatggtatgctggttttggtgctgatattgcgacagtagtt
tatgttggtttcgatgataacaaacgtgaacttggtaaaggtgcttcaggttcagtaaca
gcgttaccagcttgggtgaattatatgaaagtagcccttgctgataaacctgtgcaaaaa
gatgttgtgccaggcaacattgttgaagtgaaaatcgatccaaatagtggtttcttaggt
aatggacgtaaagagttctttattaaaggaacagaaccaacaaaacgatacgtggttgaa
agaggttatactgagaaatcgccaacacaaactgttcctgctcgattaggacttccacca
ccaggtgtgttgcaaagtggggaattattctaa
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