Mannheimia varigena USDA-ARS-USMARC-1312: X874_6960
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Entry
X874_6960 CDS
T03028
Name
(GenBank) AraC family transcriptional regulator
KO
K18991
AraC family transcriptional regulator, activator of mtrCDE
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvg03000
]
X874_6960
Transcription factors [BR:
mvg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
X874_6960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
Cupin_6
HTH_AraC
AraC_binding
Cupin_2
Cupin_3
JmjC_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AHG77332
LinkDB
All DBs
Position
complement(731677..732576)
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AA seq
299 aa
AA seq
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MDVLDKLLAFSQISAGLNVKCQLQGKWQLDNPYQDRQAVAHIVSQGSAYLYYNCETIRLN
QGDIVFFPKSADHTLRSQIEPVSVKTVINQAELGGFTLVQSGNTQSECDLFCLHFHYDSQ
ADLMDNLPEMLIFKATETPLNAILSLLRQEGDDPGFASKSVVNSLALVILTMIFRQYLTH
HERETVGVLKAWQDTRLRPLMREILLNPELSWQIEEMAAIIHLSRSQLIRLFNKNLGISP
HAFVHKIRLQKAAMLLKSQSDSVLSIALACGFQSEPHFITAFKKAYGETPSQYRQSKSN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacgttttagataaactcttagctttttcccaaatttcggcggggctcaacgtcaaa
tgccaactacaaggtaaatggcagttagataacccatatcaagatagacaagccgtggca
catattgtcagccaaggctcagcttatctttactataactgcgaaaccattcggctgaat
caaggtgatattgtcttttttccaaaatcggctgaccacacattacgcagccaaattgag
ccagttagtgtaaaaaccgtgattaaccaagccgaacttggtggtttcaccttggtgcaa
agcggtaatactcaatcagagtgcgatctgttttgtctccattttcactatgatagccaa
gcggatttaatggataacttacctgaaatgctgatttttaaagcgaccgaaacgccatta
aacgcaattctaagcctactccgacaagaaggcgatgatcctggttttgccagcaaatca
gtggtaaattcattggcactcgtgattttaaccatgatttttcgccaatatttaacccat
cacgaacgggaaacagtcggcgtattaaaagcgtggcaagatactcgcttacgcccttta
atgcgtgaaattttactgaaccccgagctttcttggcaaattgaggaaatggcagcgatt
attcacctctctcgctcacagcttattcgtttgtttaataaaaatttaggcattagccct
cacgcttttgtgcataaaatccgactacaaaaagcggcaatgttactgaaaagccaatct
gattcggtattaagcatagctttggcctgcggttttcaatctgagccgcattttattacc
gcctttaaaaaagcttatggcgaaacaccgagccaatatcgacagagtaagagcaattag
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