Mannheimia varigena USDA-ARS-USMARC-1312: X874_7290
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Entry
X874_7290 CDS
T03028
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg03030
DNA replication
mvg03430
Mismatch repair
mvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X874_7290
03430 Mismatch repair
X874_7290
03440 Homologous recombination
X874_7290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvg03032
]
X874_7290
03400 DNA repair and recombination proteins [BR:
mvg03400
]
X874_7290
Enzymes [BR:
mvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X874_7290
DNA replication proteins [BR:
mvg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X874_7290
DNA repair and recombination proteins [BR:
mvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X874_7290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
ResIII
AAA_2
AAA_14
PIF1
AAA_18
AAA_30
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
AHG77365
LinkDB
All DBs
Position
complement(766736..768772)
Genome browser
AA seq
678 aa
AA seq
DB search
MSYQVLARKWRPQRFSEVVGQQHVLSALENSLREDRLHHAYLFSGTRGVGKTSIARLFAK
GLNCEHGITAEPCGECANCKAIEEGHFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALEQ
SQIAKHLEFILNAESIPYETIAIEKLAKAAHGSIRDSLSLTDQAIAMSNANITLDVVSQM
LGLIDDNQPLELVQAIAQADGEKAMVIIEQIASKGVDWQQLLSDIAETLHKIAMLQLVKT
TAIEETLIHFLAKQMPPEDVQFFYQLILNSKKELPFAPEQRAGVEMAILRALAFHPKQAE
RIATVVMPSVSAAPQPNNTVANIQPKPQNQISQLRENFEKNQQKSVIVSQQAPVTESVMQ
KEENTATLSPAMAALEARKKLQQQQANLAQTEKKKPELTPPQFIAKKSENSTASLQERFI
QFAENQQQTPRQSALKAENKQKSVDDEDYRWTWLNPELENQTDSAKPSDIKQAILQERTP
ELVAKTINLSCQQDRWCEIANSLNLGGFSRQIALNSYLDKYADNHLSLVLKPNMAHLDNV
ESRKNLEVALAEKGYSYDLSIGDNADKQTPLEIRRAIFKQLTEAAKSALLNDEKLMLLRN
AFDAQIDESTIRAVAQSE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagttttagcccgtaaatggagaccacaacgcttttcggaagtcgttggg
caacaacacgttttatctgctcttgaaaacagtttaagagaagataggcttcatcacgcc
tatctgttttctggcacgcgtggtgtaggtaaaacttctattgcccgcctttttgctaaa
gggctaaactgtgaacatggcattactgccgaaccttgtggtgaatgtgctaactgtaaa
gccattgaagagggacattttatcgatctcattgagatcgacgcagcctctcgcaccaaa
gtagaagatactcgtgaactactggataacgtacaatacaaaccaaccgttgggcgtttt
aaagtttatctgattgacgaagtgcatatgctctctcgccacagtttcaatgcgttactc
aaaacccttgaggaaccgcctgaatatgttaaattcttattagcaactactgatccgcaa
aaactgccgatcacgattctttctcgctgtatgcaattccatttgcgtgcattagaacaa
tcacaaattgcgaaacatttagagtttattcttaacgcagaaagcattccctacgaaacc
attgctatcgaaaaactagcgaaagcagcacatggtagtattcgtgattcacttagctta
actgatcaagctatcgcaatgagtaatgccaatattactctcgatgtagtaagccaaatg
ttagggcttattgatgacaatcaaccactcgagttagtacaagcaatcgcacaagctgat
ggcgaaaaagcgatggtaattattgaacaaatagcctccaaaggtgtagattggcagcaa
ttactgagtgatattgccgaaacattgcacaaaattgcaatgttacaattagtcaaaacg
accgccatagaagaaacgcttattcattttctggcaaaacagatgccacctgaagatgtg
cagtttttctatcaacttatcctgaacagcaaaaaagagctgccttttgcccctgaacaa
cgtgctggcgtggagatggcaattctgcgagctttagctttccacccgaaacaggcagaa
aggatagcaactgtcgtaatgccaagcgtatctgctgccccacaacctaacaatactgtt
gccaatattcaaccaaagccacaaaatcagatttctcaactaagagaaaattttgaaaaa
aatcaacaaaagtctgtaattgtttcacagcaagcacctgtaacagaatctgtaatgcag
aaagaagaaaatacagctactctttctcctgcaatggctgcactagaggctcgtaaaaaa
ttacagcaacagcaagcgaatttagctcaaactgaaaaaaaaaagcctgagttgacccct
cctcaatttattgcaaaaaaatcggaaaattcgaccgcttcattgcaagagcggtttatt
caatttgctgaaaatcaacaacaaacaccgcgacaatctgctctaaaagcagaaaacaag
cagaaaagtgtagatgatgaagattaccgttggacgtggctcaatcctgaattagaaaac
caaacagacagtgccaaaccttccgacatcaaacaagctattttgcaagaacgtacacct
gaactagtggcaaaaaccattaatttatcttgccaacaagatagatggtgtgagattgct
aactcacttaatttaggtggtttttcacgccaaattgccttaaatagctatttagataaa
tacgcagataaccatctttcattagtattaaagcccaatatggcacatttagataatgtg
gaatctcgtaaaaatttagaagtagcattggctgaaaaaggctatagttatgatttatcc
atcggtgataatgcagataaacaaacgccgttagaaattcgtcgggcaattttcaagcaa
ctcactgaagcagccaaatctgctttgctgaacgatgaaaaattaatgttacttcgcaac
gctttcgatgcacaaattgatgaatcaaccattcgagccgttgcacagagtgagtaa
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