Mannheimia varigena USDA-ARS-USMARC-1312: X874_8190
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Entry
X874_8190 CDS
T03028
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg03030
DNA replication
mvg03430
Mismatch repair
mvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X874_8190
03430 Mismatch repair
X874_8190
03440 Homologous recombination
X874_8190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvg03032
]
X874_8190
03400 DNA repair and recombination proteins [BR:
mvg03400
]
X874_8190
Enzymes [BR:
mvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X874_8190
DNA replication proteins [BR:
mvg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X874_8190
DNA repair and recombination proteins [BR:
mvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X874_8190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DUF4388
TIG_plexin
Blo-t-5
LpxI_N
Motif
Other DBs
NCBI-ProteinID:
AHG77455
LinkDB
All DBs
Position
complement(861433..862455)
Genome browser
AA seq
340 aa
AA seq
DB search
MQKIFPETLQLSLNKGLQPFYLLTGNDLLLINESKDLIIQSARSNGFDEKKEIDVKNDTN
WEALFEATQEMGLFFTRQILILNFPESPTATQFKKLAELCALVHSDLLFILHLPKFLKTM
EKQAWFTQIEPQLVQVNCQTPEISKLPQWLSNRAKEMNLQIEFEANQLLCYSYEGNLLAL
KQALQLLQLQCNDGQITLNRAKEVVENSAQFTPFQWIDALFEGKIGRAQRILHHLQNEEV
QAVVLLRIVQKELMILLEITRSPTPILSEQVLFNGNLRTEFDRLKIWQNRRPFYSQVVQR
LTYKKLYALIQQLAELERKVKQEFSDDIWQELERFSAQFT
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcttcccagaaacacttcaattatctttaaacaaaggattacaacccttt
tatttattaacagggaatgatttgctcttgattaatgaatccaaagacttgattattcaa
tctgctcgctcaaacggatttgatgaaaaaaaagagattgacgtaaaaaatgacacaaac
tgggaagctctttttgaagcaactcaagagatggggctattttttacacgtcaaattctt
attctcaattttcctgaatcaccaacagctacgcagtttaaaaagctcgccgaactctgt
gctttagtgcattccgatctgctctttattctccatttaccaaaatttttaaaaacaatg
gaaaagcaggcttggtttactcaaattgagcctcaattagtgcaagttaattgccaaaca
cctgaaattagtaaactaccgcaatggttaagcaatagagcaaaagagatgaatttacaa
attgagtttgaggcaaaccaactgctctgctatagctatgagggaaatctacttgcccta
aaacaagccctacagctattacaacttcaatgtaacgatggccaaattacacttaaccga
gcaaaagaagtagtagaaaattctgctcaatttactccattccaatggattgatgctctg
tttgaggggaaaatcggacgagctcaacgtattttacatcacttacaaaatgaagaagta
caagcagttgttttattgcgtattgtgcaaaaagagctaatgattttgcttgaaattacc
cgctctccaacgccgatattaagcgaacaagttctctttaatggtaatttacgaacagaa
tttgaccgcttgaagatctggcaaaaccgcaggccgttctatagccaagtagtacaacgt
ttaacttataaaaaactttacgccctaatccaacaacttgctgaattagagcgtaaagta
aaacaagaatttagcgatgatatttggcaagaattagagcgtttttccgctcaatttacc
taa
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