Mannheimia varigena USDA-ARS-USMARC-1312: X874_8230
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Entry
X874_8230 CDS
T03028
Name
(GenBank) Seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
X874_8230
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mvg01007
]
X874_8230
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvg03016
]
X874_8230
Enzymes [BR:
mvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
X874_8230
Amino acid related enzymes [BR:
mvg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
X874_8230
Transfer RNA biogenesis [BR:
mvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
X874_8230
Prokaryotic type
X874_8230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Filament
CEP63
Centrobin_CC
CCDC160
Motif
Other DBs
NCBI-ProteinID:
AHG77459
LinkDB
All DBs
Position
complement(866393..867700)
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AA seq
435 aa
AA seq
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MIDQNLLRTNLDEIAQALKIKRNFILDVERVKTLEEQRKTLQVKTETLQAERNARSKNIG
AAKARGEDISALLAEVDSMGNELDTAKVELDKVQSEIRDLLLSVPNLPAEEVPLGKDDSE
NQEVSRWGEPRQFDFEVKDHVALGENLGGLDFAAGVKLTASRFVVMKGKLARLHRALSQF
MLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDLFHTQPLTGQDPNEVQRSYSLIP
TAEVPVTNLVRDEIIDEDTLPLRYTAHTPCFRSEAGSYGRDTRGLIRMHQFEKVEMVQIV
APEKSMEALEELTGHAEKVLQLLGLPYRKVLLCTGDMGFGSAKTYDLEVWLPAQNTYREI
SSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVP
EVLRPYMGGVEVITA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccaaaatctacttcgtaccaatcttgatgaaatcgcacaagcacttaaaatt
aaacgtaatttcattttagatgtagaacgtgtaaaaacccttgaagagcaacgtaaaacg
ctacaagtaaaaacagaaactttacaagctgagcgtaatgctcgctcgaaaaatatcggt
gcagcgaaagctcgtggcgaagatatttcagcacttttagccgaagtagattcaatgggc
aacgagttagataccgcaaaagtcgaactcgacaaagttcaaagcgaaatccgtgattta
ttactctcagtgccaaacttaccggcagaagaagtgccattaggtaaagatgacagcgaa
aaccaagaggtttctcgttggggcgaacctcgccaatttgattttgaggtgaaagatcac
gttgcattaggtgaaaacttaggcggattagactttgctgccggcgtaaaattaaccgct
agccgttttgtggtgatgaaaggtaaactcgctcgcttacaccgtgcattatcacaattt
atgttggatttacataccgaacagcacggttatgtggaaaccaacgtgccgtttttagta
aaccacgataccctttatggtacaggtcagctaccaaaattcggtgaagatttattccac
acccaaccattaactgggcaggatccgaacgaagtacagcgttcatacagcttaattcca
accgcagaagtaccggtaaccaacttggttcgtgatgaaattattgatgaagatacgttg
ccattacgttataccgctcacactccgtgcttccgttctgaagctggctcttacggacgt
gatacccgtggtttaattcgtatgcaccaatttgaaaaagtggaaatggtgcagatcgtt
gccccagaaaaatcaatggaagcattggaagaattaactggccacgctgaaaaagtgtta
caacttttaggcttaccataccgtaaagtgctactctgcactggcgatatgggcttcggt
tcagcgaaaacttacgatttagaagtgtggttgcctgctcaaaatacgtaccgtgaaatt
tcatcttgctcaaatatgtgggatttccaagcccgccgtatgtcagctcgttgcaaagcg
aaaggcgacaagaaaactcgcttagttcacacgttaaacggttcaggtttagcggttgga
cgtacacttgtagccgtacttgaaaactaccaaaatgctgatggctctattaccgtgccg
gaagtgttaagaccttatatgggtggagtggaagtgattacggcttaa
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