Mannheimia varigena USDA-ARS-USMARC-1312: X874_8540
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Entry
X874_8540 CDS
T03028
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg00330
Arginine and proline metabolism
mvg00480
Glutathione metabolism
mvg01100
Metabolic pathways
mvg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
X874_8540
09106 Metabolism of other amino acids
00480 Glutathione metabolism
X874_8540
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
X874_8540
Enzymes [BR:
mvg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
X874_8540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
AHG77490
LinkDB
All DBs
Position
898368..900542
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AA seq
724 aa
AA seq
DB search
MELIMLHLKIAYSSLVQPYFHTTRELVAIDKTDFTDVGAIVLSTDDVHQYIDRILEKEFN
IPVFIVVESGKILAPQYFDQVYHIQDLNNYDINLYSRQIETAVHLYEDKMLPPFFKMLSE
YVEMGNTAFDCPGHQGGQYFRKHPAGRFLYDFYGENIFRSDICNADVKLGDLLIHEGAAC
DAQKYAAQMFNADKTYFVLNGTSSANKVVTNALLSPGDLVLFDRNNHKSIHHGALIQAGA
TPIYLETARNPFGFIGGIDSHCFDDDYLKSLVKEIAPEKLNQQRPFRLAVIQLGTYDGTI
YNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMKECSPLLLELNEDDPGIIVTQSVHKQQ
AGFSQASQIHKKDKHIKGQSRYCNHKRFNNAFMLHASTSPFYPLFATLDVNAKIQGSSAG
RRLWLDCVKNGIEARKLVLNSCQLIKPFIPPYVNGKKWQDYSTDEIAQDLEFFKFHAGDS
WHKFEGYTENQYFVDPCKFMLTTPGIDIQTGEYEEFGIPATILANYLRENGIIPEKCDLN
SILFLLTPAETLTKMQTLVAQITSFEKHIKQNSLLKEVLPSVYANNAERYNGYTIRQLCQ
EMHGLYVARDVKTLQRNLFRKATLPPYVMNPKDANIELVRNNVELVPLTDIVGRVAAEGA
LPYPPGVICVVPGEKWNETAQKYFLALEEGINVLPGFAPEIQGVYLQKDPDGRTRAYGYV
LIEQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggagttaattatgttacatttaaaaatcgcatatagttcattagttcaaccttatttc
catacaacaagagagttagttgctattgataaaactgattttacagatgttggtgctata
gtattaagtacggatgatgttcatcaatatattgatagaattttggaaaaagaattcaat
attccagtatttattgtggtggagtcagggaaaatcttagcccctcaatattttgatcag
gtttatcatatacaagatcttaataattacgatatcaatttatatagtcgccaaattgaa
acagcagtacatctttatgaagacaaaatgttaccaccgttcttcaaaatgttaagtgag
tatgttgaaatgggaaatactgcttttgattgcccagggcatcaaggtggacaatatttc
cgtaagcatccagcaggtcgatttctctatgatttctatggtgaaaatattttccgttcc
gacatctgtaatgctgatgtaaaacttggtgatttattaattcatgaaggtgctgcttgc
gatgcacaaaaatacgctgcacagatgtttaatgctgataaaacctactttgttttaaat
ggaacctcttctgctaataaagttgttactaatgcattactttctcctggtgatctcgtt
ttatttgaccgtaataatcataaatctattcaccatggtgcattaattcaagctggtgca
acaccaatttatcttgaaactgcccgtaatccatttggttttattgggggaattgatagt
cattgttttgatgatgactatctgaaatctttagtcaaagaaatcgctcctgagaaatta
aatcaacaacgcccatttcgtttagcagttattcagcttgggacatatgatggaactatc
tataacgcacgtcaagttgtcgataaaattggtcatctttgtgattatatcttatttgat
tcagcttgggtgggatatgaacaatttattccaatgatgaaagagtgctctcctttatta
ttagaattgaatgaggatgatcctggtattattgttactcaatccgtacataaacaacag
gctggtttttctcaagcatcacaaattcataaaaaagataagcatattaaaggccagtct
cgctattgtaaccacaagcgttttaataatgcttttatgctacatgcctcaactagccca
ttctatccgttatttgcaacattagatgtaaatgccaaaatccaaggtagctcagcagga
cgtcgattatggctagattgtgttaaaaatggtattgaagcccgcaagttagtacttaat
tcttgtcaattaattaagccatttattccaccatatgtaaatggtaagaaatggcaagat
tattctactgatgaaattgcacaagatcttgagttctttaaattccatgccggtgattct
tggcacaaatttgaaggctataccgaaaatcaatattttgttgacccatgcaaatttatg
ttaacaacaccaggaattgatattcaaactggtgaatatgaagaatttggtattccagcc
actattttggctaactatctacgtgaaaacggtattattccagaaaaatgtgatttgaac
tctatattattcttacttacccctgcagaaacccttacaaagatgcaaacacttgtagca
caaattacctcatttgaaaaacacattaaacaaaattcattgttgaaagaagtgttacca
agcgtttatgccaataatgctgagcgctataacggctacaccatccgtcaactttgccaa
gaaatgcacggcctgtatgttgctcgtgatgtgaaaacattacaacgtaatctatttagg
aaagcgacattgccaccatatgtgatgaatcctaaagatgctaacattgaattggtacga
aataatgtagaacttgttccacttaccgacattgtaggtcgtgtcgccgcagaaggtgca
ttaccttaccctccaggtgtcatttgtgttgttccaggtgaaaaatggaatgaaactgcc
caaaaatactttttagcattggaagagggtattaacgtgttacccggttttgcaccagaa
attcagggagtttatttacagaaagatcctgatgggcgcacacgagcttatggttatgta
ttaattgaacaataa
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