Mannheimia varigena USDA-ARS-USMARC-1312: X874_8720
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Entry
X874_8720 CDS
T03028
Name
(GenBank) soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mvg01011
]
X874_8720
Enzymes [BR:
mvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
X874_8720
Peptidoglycan biosynthesis and degradation proteins [BR:
mvg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
X874_8720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cas9_C
DUF1797
Motif
Other DBs
NCBI-ProteinID:
AHG77508
LinkDB
All DBs
Position
925043..927184
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AA seq
713 aa
AA seq
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MWKKTLLTVFLVSQYTFAAGTGKELSKSYTETELKNDWLNIYQKEQQHADNLRLKQRENF
QQINYLVDAAVSQKNISPATEQIIQRLLATLSGYPLEMEAEWKLLNAKLTLKQATENEIK
AFISKYPDSLYQKQLQNFTFEQLYREQKFGELMEYAEVAKPTQLADQCRLFSARYEMAAS
KAQINPMIEQKVENAELSALVKGFDDFWLVNPKLTPDCANLESFWRDQGFKTDEKVRLKA
VELVKQNANTEIANLAINATDENLKTWLSSVEKVVSNPKELQNFIENQPLDSTFKAENKA
IIVELLPKYIRTQPEKLDNPTFEQYQLWAEKYQFNEDELKVLKSNFISRHFDNEEPTFQL
WRDEQIKALGVDNLLERRLRMAIWQKTDLNEWLQSLSQEAKGKIEWRYWTAKIEKNEAKR
KAIFEELAKERGFYPMLAAQQLGAAYRFPIIEVADLTQAQRELYEKQFERIQELRELGLI
DQAKRVWINLINNVKPEKGGSSPVKTQLAIIKYAKEQNWYDLAVEGTIQIKAFDNIDLRL
PNAYSDWFELNLQDKKISKSFAQAIARQESAWNPQAQSHANARGLMQMLPTTAEKTAKDN
SLPFRGERDLFRSFNNIMLGTTHLMELNEKYPNNRILISSAYNAGAGRVEQWLNRSKGTL
EMDEFIASIPFYETRGYVQNVLAYDYYYQILYGDRTSKNGLKMFYQEELERKY
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagaaaacattgcttactgtatttttagtaagccaatatacatttgctgcagga
acagggaaagagctatcaaaaagctatactgaaacagaattaaaaaatgattggttgaat
atttatcagaaagagcaacaacacgcagataatttacgtctaaagcagagagaaaatttc
cagcaaattaattatttagttgatgcagcagtcagtcagaaaaatatatcgcctgcaaca
gagcagattattcagcggttattggcaactttatcgggctatccgttagaaatggaggca
gaatggaagttgttaaatgctaaactgacgttgaagcaagccacagaaaacgaaattaaa
gcatttatttcaaaatatccggattctttgtatcaaaaacagttacagaactttacgttt
gaacagctctatcgtgagcagaaatttggagaattaatggagtatgcagaggttgcaaaa
ccaacgcaattagcggatcagtgccgtctattttcagctcgttatgaaatggctgccagt
aaagctcaaattaatccaatgatagagcaaaaagtagaaaatgcagaattgtccgcctta
gtgaaagggttcgatgatttttggctggttaatcctaaattaactcctgactgtgcgaat
ttagaaagtttttggcgagaccagggtttcaaaacagatgagaaagtgcgtctgaaagcg
gtcgaattagtcaaacaaaatgcaaatacggaaattgcaaatttagcaattaatgcaacg
gatgaaaatttgaaaacgtggctcagttcagttgaaaaagtagtgagtaatccgaaagaa
ttgcaaaattttattgaaaatcaaccgcttgattctacatttaaagcagaaaataaagca
attatagtggaattattgccaaaatatatccgcactcaaccagaaaaattagataatcca
acctttgagcaatatcaattgtgggctgagaaatatcaatttaatgaagatgaacttaaa
gtattaaaatccaattttatcagccggcattttgataatgaagagccaacattccaactc
tggcgtgatgaacagattaaagccttaggcgttgataatttattagaacgcagattgcgt
atggcaatttggcaaaaaacagatttaaatgaatggctgcaatcactctctcaagaggct
aaagggaaaatagaatggcgttactggacggctaaaatcgaaaaaaatgaagctaagcgt
aaagcaatatttgaggagttagccaaagaacgagggttctacccaatgctggctgctcaa
caattaggggctgcttatcgattccctattattgaagtggcagatttgactcaggctcaa
cgtgaattgtatgaaaagcaatttgagcgtattcaagaattgcgtgaacttgggttaatc
gatcaagctaagcgagtttggattaatttaatcaataatgtaaaacctgaaaaggggggg
agttcgcctgttaaaacgcagcttgccattattaaatatgcaaaagagcaaaattggtat
gatttagcagtggaggggacaatccagataaaagcctttgataatattgacttacgtttg
ccgaatgcgtattccgattggtttgagttgaatttgcaagataagaaaatcagtaaatct
tttgctcaagccattgcacgccaagagagtgcatggaatccacaagcccaatcacatgcc
aatgctagagggctaatgcagatgttgccaacaacagcggaaaaaacagcaaaagacaat
agtttaccgtttagaggcgagcgagatctgtttagatcattcaacaatattatgcttggc
acaacgcatttaatggagttaaatgaaaaatatccaaataaccgtattttgatttcatca
gcctataatgcaggtgctggacgtgtagagcagtggctgaatcgtagtaaaggaacatta
gaaatggacgagtttattgcaagtattccattttatgaaaccaggggttatgtgcagaat
gtgttagcatatgactattactatcaaatcctttatggtgataggacatctaaaaatggg
ttaaaaatgttctatcaagaggaattagagagaaaatattaa
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