Mannheimia varigena USDA-ARS-USMARC-1312: X874_8890
Help
Entry
X874_8890 CDS
T03028
Name
(GenBank) Helix-turn-helix-domain containing protein AraC type
KO
K02099
AraC family transcriptional regulator, arabinose operon regulatory protein
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvg03000
]
X874_8890
Transcription factors [BR:
mvg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
X874_8890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Vif
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AHG77525
LinkDB
All DBs
Position
complement(949281..950138)
Genome browser
AA seq
285 aa
AA seq
DB search
MYKNLSLLSLDSSFDLELVAGLTQCEKGNYLDSIVHKQGMDGYMLQLTTFGCGTIHDGRN
TFNVSRGQLLLFSPNAIQHYYRNTEQQSWHYKWIYFLPNSKWNKWLNWSSKEENIGRIQI
NDNRYFQEISQLFSKIELELKSSHFFKEDVATALLEYLLMKCISAEKIQIIPTIDQRVLN
VCNLILSNLSRNDSIEYIAKTVFLSPSRLSHLFKESLGVSLVQWRELQRIAESKKLLYFS
NISILNIAKSLGYEDSLYFSKIFKKHTGLSPSEFRAIELYKNNRV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaaatctttcattactttcattagactcctcatttgatcttgaattagttgct
ggattaactcaatgtgaaaagggaaactatcttgattctatagtccataaacaaggtatg
gatggctatatgttacaacttactacttttggctgtggaaccattcatgatggcagaaat
acctttaatgtaagtcgtgggcagctcctactattttcaccaaatgctattcaacattac
tatcgtaatactgaacaacagtcttggcattataaatggatctattttttacccaattca
aaatggaataaatggttaaattggtcaagtaaagaagaaaatattggtcgaattcaaatc
aatgataatcgctatttccaagaaattagccaactattctccaaaattgagttagagttg
aaatcgagtcatttttttaaagaggacgtagcaacagctctattggaatatttattgatg
aaatgtatctcagctgaaaaaatccagatcatcccgactattgatcagcgtgttcttaat
gtttgtaatttaatactttccaatttatctcgaaatgacagtattgaatatatagcaaaa
accgtttttctatctccatcacgcctatcacatctatttaaagaatctttaggcgttagt
ttagttcaatggcgagaattacagcgtattgcagaatcaaagaagctactgtatttctct
aacatctcaatattaaatatagcgaaatcattgggttatgaagactctttgtatttttct
aagattttcaaaaagcatacaggcttatcaccttcagaatttagagctatcgaactctat
aaaaataatagagtgtga
DBGET
integrated database retrieval system
