Myxococcus virescens: ACN6A1_09675
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Entry
ACN6A1_09675 CDS
T11273
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mvh Myxococcus virescens
Brite
KEGG Orthology (KO) [BR:
mvh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvh03016
]
ACN6A1_09675
Enzymes [BR:
mvh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACN6A1_09675
Transfer RNA biogenesis [BR:
mvh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACN6A1_09675
Prokaryotic type
tRNA splicing ligases
ACN6A1_09675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
XWU87916
LinkDB
All DBs
Position
2280018..2281481
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AA seq
487 aa
AA seq
DB search
METLPEVPQQLEPLIRQIGPALYELGQGFREDMRVPARIVADSELLQQMVHDRSVPQLVN
VTTLPGIQGFAIGMPDMHEGYGFPVGGVAGTALPDGVISPGGIGFDINCGVRLLATGLRH
EDVKEVLPEVAHDLARSIPTGFGRHGRLSLAPEQMDRVLTEGVPYLVDVLGLGAPEDVDY
LEARGCLDGADTAKVSVRARERGHDQLGTLGGGNHFLEVQRVERVLDSEVAPALGLFEGQ
LTVLIHTGSRGLGHQVCTDAVRTMDRALAREGIQLVDRQLACAPLSSAEGQDYFAAMCAA
ANFAWANRQVLTHRVREVFRRWFGDRSAAWPRIVYDVAHNIAKLEPHGGQRLCVHRKGAT
RAFGPGHPELPAAYHQVGQPVFIPGSMGTASFVLVGKEAAEAISLSSACHGAGRRLSRAA
SKRQVVGSELRAALNRQGIAVECPSNAELAEEAPLAYKDVDRVVDVVEAAGIARKVARLV
PLAVLKG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggagacacttcccgaggtcccgcagcagctcgagccgctcatcaggcagatagggccc
gccctgtatgaactgggccagggcttccgcgaggacatgcgggtaccggcccgcatcgtc
gcggactcggagttgctccagcagatggtccacgaccggagcgtgcctcagctcgtcaat
gtcaccacactgccgggcatccagggcttcgccatcggaatgccggacatgcacgagggc
tacggcttccccgtgggcggcgtggcgggcacagcgttgccggatggtgtcatctcgccg
ggcggcatcgggttcgacatcaactgcggtgtgaggttgctggcgaccgggcttcggcac
gaggacgtgaaggaggtcctgccggaggtggctcacgacctcgctcggagcattcccaca
ggcttcggccggcatggccgcctgtcgttggctcccgagcagatggaccgggtcctcacg
gagggcgtcccctatctggtggacgtattgggactgggagcaccggaggacgtcgactac
ctggaggccagaggctgcctcgatggcgccgacacggccaaggtctccgttcgggcacgg
gagcgggggcatgaccagcttggcacgctcggtggcggcaatcacttcctggaagtgcag
cgggtggagcgcgtcctcgactcggaggtggccccggcactcgggttgttcgagggccag
ctcaccgtgctcatccatacgggctcgcgcggactggggcaccaggtctgcacagatgcg
gtgcgcaccatggaccgcgccctggcccgcgagggcatccagctcgtggaccgtcaactc
gcctgtgcgccgctgtcgtcggcggaggggcaggactacttcgcggccatgtgcgccgcg
gccaacttcgcctgggccaaccggcaggtgctcacccaccgggtgcgtgaggtgttccgc
cggtggttcggagaccgttccgccgcgtggcctcgcatcgtctatgacgtggcccacaac
atcgcgaagttggagccgcatggaggccagcgcctctgtgtacaccgcaagggcgcaacg
cgggcctttggtccagggcaccccgagctccccgcggcctaccatcaggtcggccagccc
gtgttcatccccggaagcatgggcacggcgtcgttcgtgctggtggggaaggaggctgcc
gaggccatctcactcagcagcgcctgccatggggcgggacggcggctgagccgggccgct
tccaaacgccaggtggtgggaagtgagctgcgcgcggcgctgaatcgtcagggcatcgcc
gtggagtgtccctccaatgcggagctcgcggaggaagcgcccctggcctacaaggacgtg
gatcgggtggtggacgtggtcgaggcggctggcatcgcgcggaaggtggcgcggctggtg
ccgctcgcggtgttgaaaggctga
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