Myxococcus virescens: ACN6A1_11800
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Entry
ACN6A1_11800 CDS
T11273
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mvh Myxococcus virescens
Brite
KEGG Orthology (KO) [BR:
mvh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvh03016
]
ACN6A1_11800
Enzymes [BR:
mvh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACN6A1_11800
Transfer RNA biogenesis [BR:
mvh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACN6A1_11800
Prokaryotic type
tRNA splicing ligases
ACN6A1_11800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
XWU88313
LinkDB
All DBs
Position
2770745..2771980
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AA seq
411 aa
AA seq
DB search
MSRINGNYEVLSDEAGRPIKAWTVGVPFEDEAKKQLRNLRGLPFIHQWVAVMPDVHRGYG
ATVGSVVPTVGAVVPAAVGVDIGCGMIAVRTTLRADQLPDSLRGVRSAIERAVPHGRSDN
GGRNDVGAWRVAPARHQQEWARLVEGYDRIVGKHPRIGRGPELSHLGTLGTGNHFIELCL
DESDGVWLMLHSGSRGVGNRIGSYFIELAKEDMRRWFINLPDGDLAYLAEGTEHFEDYVF
AVSWAQDFAATNRALMLQAAVDALQVSGELPPFELKDAAVNCHHNYIAREHHFGKNCFVT
RKGAVRAREGDLGIIPGSMGARSFIVRGKGNADSFHSCSHGAGRVMSRAAAKRRFTVEDH
VEATAGVECRKDVDVIDETPAAYKSIDAVMAAQADLVEVVHTLKQVVCVKG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcatcaacgggaactacgaggtgctgtcggacgaggcgggccgccccatcaag
gcgtggacggtgggggttccgttcgaggacgaggcgaagaagcagctccgcaacctgcgt
ggcctccccttcatccatcagtgggtcgcggtgatgccggacgtgcaccgcggctacggc
gcgacggtggggagcgtggtccccacggtcggggcggtggttccggcggcggtgggcgtg
gacatcggctgcgggatgatcgccgtccgcacgacgctgcgagcggaccagctcccggac
tcgctgcggggagttcgctcggcgattgagcgcgcggtgccgcatggccgctccgacaac
ggtggccgcaacgacgtgggggcgtggcgtgtggcgcccgcgcggcaccagcaggagtgg
gcgcggttggtggaggggtacgaccgcatcgtcgggaagcatccgcgcatcggccgtggg
ccggagctgtcgcacctggggacgctgggaacggggaaccacttcatcgagctgtgcctc
gatgagtcggatggcgtgtggctgatgttgcactccggttcgcgcggcgtggggaaccgc
atcgggagctacttcatcgagctggcgaaggaggacatgcgccgctggttcatcaacctg
ccggacggggacctggcgtacctggcggaagggacggagcacttcgaggactacgtcttc
gcggtgagctgggcgcaggacttcgccgcgacgaaccgcgcgctgatgctgcaagcggcg
gtggacgcgctgcaggtgagcggtgagttgcctccgttcgagctgaaggacgcggcggtg
aactgccaccacaactacatcgcccgtgagcaccacttcgggaagaactgcttcgtgacg
cgcaagggggcggtgcgagcgcgcgagggtgacctcggcatcatccccggaagcatgggg
gcgcgttcgttcatcgtccgcgggaaggggaacgcggacagcttccactcctgcagccac
ggcgcggggcgggtgatgtcgcgtgcggcggcgaagcggcgcttcacagtggaggaccac
gtggaggcgaccgccggcgtggagtgccgcaaggacgtggacgtcatcgacgagacgccg
gctgcgtacaagtccatcgatgcggtgatggcggcgcaggcggacctggtggaggtggtc
cacaccctgaagcaggtcgtgtgcgtgaagggctag
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