Myxococcus virescens: ACN6A1_16185
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Entry
ACN6A1_16185 CDS
T11273
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mvh Myxococcus virescens
Pathway
mvh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN6A1_16185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvh03019
]
ACN6A1_16185
Enzymes [BR:
mvh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACN6A1_16185
Messenger RNA biogenesis [BR:
mvh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACN6A1_16185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
XWU89138
LinkDB
All DBs
Position
3953328..3954833
Genome browser
AA seq
501 aa
AA seq
DB search
MTFDELQLHDTLLRAVKAEGYTTPTPIQQKAIPHALAGRDVLGVAQTGTGKTAAFALPIL
QRLSAKAPAGGARPVRCLVLTPTRELAGQVGDSFGTYGKGLPLRHAVIFGGVGQNPQVQT
LRSGVDVLVATPGRLLDLMEQGFVSLRSLEVFVLDEADRMLDMGFIHDVRRVIKALPPKR
QTLFFSATLPPDIVDLARSILTDPIRVEVTPASSTAETVSQQVYFVEREQKRGLLTHLLK
EGNIHRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLVA
TDIAARGIDIDGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRDIE
RTIRRNVPVVEDHPYRSGQPAPRPVSHASGAAPEARPSGNGGRPQGTPRPAGNGGGGGHS
AGASRRRRGGRGGAGGGGRGQGRPEGGRSAQGSGGSGGNSSRGGQGGSRGSGGGRPAVAQ
APAKAPEASPLPPRRPSPKWF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgacgaacttcagcttcacgacaccctcctgcgcgccgtcaaggcggagggt
tacaccacccccacgcccatccagcagaaggccatcccccacgcgctggccgggcgggat
gtgctcggcgtggcccagacgggcacgggcaagacggcggccttcgcgctgcccatcctc
cagcggctgtccgccaaggcgcccgcgggcggggcgcgcccggtgcgctgcctggtcctg
acgcccacgcgtgagctggcggggcaggtgggcgacagcttcgggacctacggcaagggg
cttcccctgcgtcacgccgtcatcttcggtggcgtgggccagaatccgcaggtccagacg
ctgcgcagtggcgtggatgtgctggtggccacgccgggccgcctgctggacctgatggag
cagggcttcgtgtcattgcgctcgctcgaggtgttcgtgctcgacgaggcggaccgcatg
ctcgacatgggcttcatccacgacgtgcggcgcgtcatcaaggcgctgccgcccaagcgg
cagacgctgttcttcagcgccacgctgcctccggatatcgtggacctggcgcgcagcatc
ctcacggaccccatccgcgtggaggtgacgccggcgtccagcaccgcggagacggtgagc
cagcaggtgtacttcgtggagcgcgagcagaagcgcgggctgctgacgcacctgctgaag
gaaggcaacatccaccgcgcgctcgtcttcacccgcaccaagcacggcgcgaaccgggtg
gcgaagcagctggagggcgcgggcgtcagctcggcggccatccacggcaacaagagccag
aacgcccgtgagcgcgcgctcgacgagttccgctccgggacgctccgcgtgctcgtggcc
acggacatcgccgcgcgcggcatcgacatcgacgggctgagctacgtcgtcaactacgac
ctgcccaacgtgccggagcagtacgtgcaccgcattggccgcaccggccgcgcgggggcc
agtggcaccgctgtgtcgttctgcgacgccgaggagcgcgcgtacctgcgcgatatcgag
cgcaccatccgccgcaacgtgcccgtggtggaggaccatccgtaccgctcgggccagccc
gcgccgcgtcccgtgagtcatgcgtccggcgccgcgccggaggcccgtccttcgggcaac
ggtgggcgaccccagggcacgccgcgtcccgcgggcaatggtggtggaggcgggcactcc
gcgggggcttcgcgccgccgccgggggggccgtggtggcgctggcggcggaggccgtgga
cagggccgtcccgagggtggccgctcggcgcagggctcgggtggctccggtggcaactcc
agccggggtggccagggcggttccaggggttcgggtggcggccgtcccgcggtggcgcag
gctccggcgaaggcccccgaggcctccccgcttcctccgcgtcgcccgtcgcccaagtgg
ttctga
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integrated database retrieval system
