Myxococcus virescens: ACN6A1_23700
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Entry
ACN6A1_23700 CDS
T11273
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mvh Myxococcus virescens
Pathway
mvh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN6A1_23700 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvh03019
]
ACN6A1_23700 (pcnB)
Enzymes [BR:
mvh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ACN6A1_23700 (pcnB)
Messenger RNA biogenesis [BR:
mvh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACN6A1_23700 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
PolyA_pol_arg_C
Motif
Other DBs
NCBI-ProteinID:
XWU83461
LinkDB
All DBs
Position
complement(5935064..5936761)
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AA seq
565 aa
AA seq
DB search
MNSQLELSAHPEEDSASKPVAADEQAPTEIPSIQVATPAEPPPAPAYADAEDEDDEEDDD
EVDPAESGLDDAVLGAEAALAAAEAEDAAEARGEDVEEVPIVLEPEPEPTPDERALHAPH
VRPSGEPAEIDPDELDPDALKVVLRLHQHGHQAYMVGGCVRDLLLGRKPKDFDIATSATP
NEVRGIFRNCRLIGRRFRLAHVYFKGGKIIEVSTFRANPTELEHAANGAEDEGDGEDLLI
THDNVFGTAQQDARRRDFTINGLFYDVAEGRVIDYVRGRRDLDERFIRTIGDPEVRMRED
PVRILRAVRFAAKLGLDIESRTYAAMEGAVEDLPRCAPARLLEETFRLIRGGVSAPALKL
LDALDALKILLPPVNAYLKQHGKEGEKTFYAFAESLDRRVSAGEALDDAILLAMLLIPIS
RSTGPEESQEGRPSVSQVVEDLLAGFVQSARLPRRIAERCRMLLLAQRTLSGERRRRSAA
FKRHPLFSEALTVFEMTVEATGENREQLEAWKAGEVPQPRAAAAEGEESDAGGQRKRRRR
RRRRRPSANGSSGESAGSSSESGDA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccagctggagctgtcggcgcaccctgaagaggacagcgcctccaagcccgtg
gccgccgacgagcaggcccccactgaaatcccctcgatacaagtcgccacccccgccgag
ccgcctccggcccccgcctacgcggatgccgaggacgaggacgacgaggaagatgacgac
gaggtagacccggccgagtcgggcctggacgacgccgtcctgggcgccgaggccgcgctg
gccgccgccgaggccgaggacgccgccgaggcccggggcgaggacgtcgaggaagtcccc
atcgtcctggagcccgaaccggagccgacgcccgatgagcgcgcgctgcacgcgccccat
gtccggcccagcggcgagccggcggaaatcgaccccgatgagctggacccggacgccctc
aaggtggtgctccgcctgcaccagcacggccatcaggcgtacatggtgggcggctgcgtg
cgtgacctgctgctggggcgcaagccgaaggacttcgacatcgccaccagcgcgacgccg
aacgaggtgcgcggcatcttccgcaactgccgcctgattggccggcgcttccggctggcg
cacgtctacttcaaaggcgggaagatcatcgaggtctccaccttccgtgcgaatccgacg
gagctggagcacgcggccaacggcgctgaggatgagggggacggtgaggacctgctcatc
acccacgacaacgtcttcggcaccgcgcagcaggacgcgcgccgccgtgacttcaccatc
aacggcctgttctacgacgtggccgaagggcgggtcatcgattacgtccgcggccgccgt
gacctggatgagcgcttcatccgcaccattggcgacccggaagtgcgcatgcgcgaggac
ccggtgcgcatcctgcgcgcggtgcgcttcgcggcgaagctgggcctggacatcgagtcg
cggacgtacgcggccatggaaggcgcggtggaggacctgccccgctgcgcgcccgcgcgc
ctgctggaggagacgttccgcctcatccgcggcggtgtgtccgcgccggcgctgaagctg
ctggacgcgctggacgcgctcaaaatcctcctgccgcccgtcaacgcgtacctcaagcag
cacggcaaggaaggcgagaagacgttctacgccttcgcggagtcgctggaccggcgcgtg
tccgcgggcgaggcgctggacgacgccatcctcctggcgatgttgctgattcccatcagc
cgctcgacggggcccgaggagtcgcaggagggccgcccgtccgtgtcgcaggtagtggaa
gacctgctcgcgggcttcgtccagtccgcgcgcctgccgcgccgcatcgccgagcgctgc
cgcatgctgctgctggcccagcgcaccctgtccggtgagcgccgtcgccgcagcgccgcg
ttcaagcggcaccccctcttcagcgaggccctcaccgtgttcgagatgacggtggaggcc
acgggcgagaatcgcgagcagttggaggcgtggaaggccggcgaggtgccgcagccgcgt
gccgccgctgcggagggggaggagtccgacgcgggaggccagcgcaagcgccgtcgccgt
cgtcgccgccgccgtccctcggcgaacggctcgtccggtgagagcgccggttcgtcctcc
gagtcgggcgacgcctga
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