KEGG   Mannheimia varigena USDA-ARS-USMARC-1296: X808_1220
Entry
X808_1220         CDS       T03027                                 
Name
(GenBank) Signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mvi  Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi02024  Quorum sensing
mvi03060  Protein export
mvi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    X808_1220
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    X808_1220
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    X808_1220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mvi02044]
    X808_1220
Enzymes [BR:mvi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     X808_1220
Secretion system [BR:mvi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   X808_1220
  Eukaryotic Sec-SRP protein
   X808_1220
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin AAA_30 YqeC AAA_31 cobW AAA_28 AAA_14 T2SSE AAA_16 AAA_33 AIP3 DO-GTPase1 Rad17 NACHT ABC_tran VirC1 APS_kinase ATP_bind_1 Helicase_RecD TsaE KTI12 GlnD_UR_UTase Thymidylate_kin AAA_19 TPP_enzyme_M AAA_24 DUF305
Other DBs
NCBI-ProteinID: AHG74649
UniProt: W0Q6W3
LinkDB
Position
complement(124784..126178)
AA seq 464 aa
MFENLSDRLSKTLRNITGKGRLTEDNIKDTLREVRMALLEADVALPVVREFINKVKERAL
GIEVNKSLTPGQEFLKIVQNELEAAMGEANEELNLAAQPPAIILMAGLQGAGKTTSVGKL
AKFLKERHKKKVLVVSADVYRPAAIKQLQTLAETLKVDFFPTETNQKPVAIAEAALKHAK
LNFFDVLIVDTAGRLHVDGEMMEEIQQIHATLNPVETLFTVDAMTGQDAANTAKAFNEAL
PLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDM
MSLIEDIQRSVDQEKAEKIAAKFKKGDDFTLEDFRDQLIEMKKMGGMMSMLDKLPGAKNL
PEHVKNQVDDKMFIKMEAIINSMTLKERANPEIIKGSRRRRIALGSGTQVQDVNKLLKQF
DDMQRMMKKMRKGGMAKMIRGMKGMMGGSGLGGLGGLSGMFGKR
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtttgaaaacctatccgatagactttccaaaacactgcgcaacattacaggtaagggc
cgcctaactgaagacaatattaaagatacgctgcgtgaagtacgtatggcattgctcgag
gctgatgttgctttacctgttgttcgggaatttatcaacaaagtaaaagagcgtgcctta
ggcattgaagttaataaaagtttaaccccaggacaagaattcttaaaaatcgttcagaac
gaattagaagcagctatgggcgaggcaaatgaggagcttaacttggcagctcaaccgccc
gctattatcttgatggcaggcttacaaggtgcgggtaaaactacctctgtagggaaatta
gcaaaattcttaaaagaacgtcataaaaagaaagtattggtggtttcagccgatgtttat
cgccctgcagcaattaaacagcttcaaacattagctgaaacattaaaagttgatttcttt
ccaaccgaaactaaccaaaaaccagtagcgattgcagaagcagcacttaaacacgctaaa
cttaatttctttgatgtgctgattgtcgataccgcaggtcgcttacatgttgatggcgaa
atgatggaggaaatccaacaaatccacgctacattaaaccctgttgaaacgctctttact
gttgatgcgatgacaggtcaagatgctgctaacacagctaaagcctttaatgaagccttg
ccattaaccggagtaatcttaaccaaagtcgatggtgatgctcgtggtggtgcggcactt
tctattcgccagattactggcaaaccgattaaattcttaggggtaggcgaaaaaaccgat
gctttagaacctttccaccctgatcgggtggcttctcgtattctaggtatgggcgatatg
atgtctttaattgaagatattcagcgttcagtcgatcaggaaaaagcggagaaaatcgca
gcaaaattcaagaagggcgatgattttacccttgaagatttccgtgatcagcttattgag
atgaaaaaaatggggggtatgatgtctatgctcgataaactaccgggtgcgaaaaatctc
cctgagcacgttaaaaaccaagttgatgataagatgttcattaaaatggaagctatcatt
aactctatgacattaaaagaacgtgcaaatcctgagattataaagggttcgcgtcgccgt
cgcattgcattaggctctggcacacaggttcaggatgtaaataaactgctcaaacagttt
gatgatatgcagcgcatgatgaaaaaaatgcgtaaaggcggtatggctaaaatgatacgt
ggaatgaaaggaatgatgggcggcagcgggcttggtggtctaggtggcttgagcggaatg
tttggaaaacgctaa

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