Mannheimia varigena USDA-ARS-USMARC-1296: X808_12300
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Entry
X808_12300 CDS
T03027
Name
(GenBank) hypothetical protein
KO
K18218
tetracycline resistance efflux pump
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvi02000
]
X808_12300
01504 Antimicrobial resistance genes [BR:
mvi01504
]
X808_12300
Transporters [BR:
mvi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
X808_12300
Antimicrobial resistance genes [BR:
mvi01504
]
Gene variants
Tetracycline resistance genes
Transporters
X808_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
AHG75753
UniProt:
W0QEX3
LinkDB
All DBs
Position
complement(1305678..1307216)
Genome browser
AA seq
512 aa
AA seq
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MNLVDYSTSLWSVLPAVIALILAIVTRKVIVSLSIGIVFGAFMLTNSSFLDALTYIKNSV
VSLVYKGSEEGLNTNNVNIILFLILLGVLTSLLSISGSNQAFANWAQKRIKGKRGAKLMA
AGLVFFTFIDDYFHSLAVGAIARPVTDKFHISRAKLAYILDSTAAPMCVLMPISSWGAYI
ITLIAGLLATHSITDYSPLGAFMTMSAMNFYAIFAMIMVFFVAYFSFDIGPMTRFERQAE
HLAEVEEETIEVKGRMRNLVFPIIALIVVTVAMMIKTGADALAESNTPFSILGAFENTTV
GISLVAGGIAALIVATICIMASGHISLKNYVRAYGLGVKMMSGAITILFFAWTINGVVSD
MQTGKYLSGLVGEHIAAGFLPAILFVLAAFMAFSTGTSWGTFGIMLPIGAAMAVHSEPAL
IIPCLSAVMAGAVCGDHCSPVSDTTILSSTGAQCNHMDHVISQLPYALLVAAASIVGYLV
VGFTQSALLGFVTTSAVMAALILIFKAKKQKK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagttgattattccacttcactttggtctgtgttaccagctgtaattgcctta
attttggcgattgtgacgcgtaaagtgatagtttccttgagcattggtattgtttttggc
gcctttatgcttactaatagtagttttctcgatgctttaacttatattaaaaatagcgtt
gtttcattagtttataaaggttctgaagagggtttaaatacgaataatgtgaatattatt
ttattccttattttattaggtgtattaacttctttattaagtatttcaggaagtaaccaa
gcctttgcgaattgggctcagaaaagaataaagggcaagcgtggtgcaaaattaatggca
gcaggcctagtattttttacctttattgatgactatttccatagtttagctgtaggggct
attgctagacctgtaacggataaattccacatttctcgtgcaaaattagcttatattctt
gattcaaccgccgcgccaatgtgcgtattaatgccaatttcaagttggggcgcttatatt
attactttaattgctggtttgttagcaacgcattcaattacagattattcaccccttgga
gcattcatgacaatgagtgcgatgaatttttatgcaatttttgcaatgattatggtattc
tttgtggcttatttctcatttgatattggcccaatgactcgttttgagcgccaagctgaa
catttagctgaagtagaggaagaaactattgaggtcaaaggtcgtatgcgtaatttagta
ttcccgattattgctttaattgtggttacggttgcgatgatgattaaaaccggtgctgat
gcattagcagaatcaaacacaccgttttcaattttaggggcttttgagaataccacggta
ggtatttcgttagtggcaggtgggattgcagcactgattgttgccaccatttgcattatg
gcaagcggtcatatttcactaaaaaattacgtccgtgcctatggtttaggtgtaaaaatg
atgtctggtgcaattaccattttattctttgcctggacaattaatggcgtagtaagcgat
atgcaaacaggtaaatatttatcaggcttagtgggcgagcatattgcagcaggtttctta
ccagcaattttatttgtattagccgcatttatggcattctcaacaggtacaagttgggga
acgttcggtatcatgttaccaattggtgctgcaatggcggttcattctgagcctgcatta
atcattccttgcttatcggcagttatggcaggagcagtatgcggagaccactgttcgcca
gtatcagatactactatcttgtcttcaacaggagctcaatgtaaccatatggatcacgtt
atttcacaattaccttatgcgttgttggttgctgctgcctctattgttggctacttagtg
gtaggtttcacacaatctgctttattaggatttgtaacaacatctgctgtgatggcggcc
ttaattttaatctttaaagcaaaaaagcagaaaaaataa
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