Mannheimia varigena USDA-ARS-USMARC-1296: X808_12310
Help
Entry
X808_12310 CDS
T03027
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mvi03036
]
X808_12310
03400 DNA repair and recombination proteins [BR:
mvi03400
]
X808_12310
Chromosome and associated proteins [BR:
mvi03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
X808_12310
DNA repair and recombination proteins [BR:
mvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
X808_12310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
NDC80_loop
Fungal_virus_P2_C
RmuC
Med9
Terminase_6
eIF3_subunit
z-alpha
MCU
Motif
Other DBs
NCBI-ProteinID:
AHG75754
UniProt:
W0QA48
LinkDB
All DBs
Position
1307649..1308068
Genome browser
AA seq
139 aa
AA seq
DB search
MSDLKSLLNIRTLRALAKDLALEQLRSIAEKLDTIIAEKEEEIRKEEQERAKQLESLNKY
TEMLKQDGLSIDELAQLLADKVIKGRKTAKARKAVAPRPAKYKFVDAEGNEKTWTGQGRT
PKALQKALDKGKKLEDFAI
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttaaaaagtcttttaaatattcgtaccttacgtgcattagccaaagattta
gctcttgagcaattaagatcaattgctgaaaaattagatactattattgctgaaaaagaa
gaagaaattagaaaagaagagcaagaaagagcaaaacaattagaaagtttaaataaatat
actgaaatgttaaagcaagatgggctttctattgatgaattagctcaattattagctgat
aaagtaattaaaggtcgcaaaacggcgaaagcacgtaaagctgtagcccctcgccctgct
aaatataaattcgttgatgcagaaggtaatgagaaaacttggactggtcagggcagaaca
cctaaggcgttgcaaaaggcacttgataaaggtaaaaaattagaagattttgctatttaa
DBGET
integrated database retrieval system
