Mannheimia varigena USDA-ARS-USMARC-1296: X808_12420
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Entry
X808_12420 CDS
T03027
Name
(GenBank) ATP-binding/permease protein CydC
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
X808_12420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvi02000
]
X808_12420
Transporters [BR:
mvi02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
X808_12420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
SfLAP
DUF87
AAA_16
AAA_29
AAA_18
RsgA_GTPase
DEAD
AAA_23
Sigma54_activat
G-alpha
ATP-synt_ab
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AHG75765
UniProt:
W0QD41
LinkDB
All DBs
Position
complement(1321563..1323230)
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AA seq
555 aa
AA seq
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MKSLFPFFSLYQTHFGRLLLGIVLAILGLAASIGLLSLSGWFLAASFLAANAIIFNFFYP
AGGVRGLAIFRTASRYFEKLVTHDATFRVLANLRVTVFKKLIPLSPSGLNRFRNSELLNR
LVADVDTLDTLYLNLISPFVSAVMIITFMAIGLSFVSVPLMLIICGTLLALLLIIPTVFY
RLGLKLGKKAVQSRANYRSQFIEWVQLNAEFLLFGNLRQAAEKLQHTEREWLNAQGQESR
LSGLSSGLLMLSNGVLTCVVIYLVSTAINVPTAQYPEALIALVVFCVMASNEILAPIGIA
FLHLGQVITAAERINEITEQQPNVKFNGSAKWQNLSQNQPLVRFENVNFAYLNGEQQVLN
NLSFEVLKGQKVAILGKTGSGKSTIFQLLNRNYDPASGQIWLNNCKIEYFPEQTLRSKLV
TLSQRVHIFSQTLKDNLLMGNATATDEQMIEVVQKVGLGYLLETEGLKLWLGEGGRPLSG
GEQRRLGLARLLLSSAELVLLDEPTEGLDRETEQQILNLILTHCAERTLLMITHRQSGLD
KFDVVYRMDSGRLLN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctgttcccattcttttctctctaccaaacgcatttcgggcgtttgttatta
ggtattgtactggcaattttaggcttggctgccagcattggcttgttgagtttatccggc
tggttcttagcggcttcctttttagccgccaatgcgatcatttttaactttttctaccca
gcaggtggcgtaaggggcttggcgattttccgcaccgcttcacgctattttgaaaaattg
gttacgcacgatgccaccttccgagtgttggcgaacttgcgtgtgacggtatttaaaaaa
ctgattccacttagcccaagcggtctaaatcgtttcagaaatagtgaattgttgaaccgt
ttagtggcagatgtagacaccctcgataccctttatcttaacctgatttctccttttgtc
agtgcggtgatgatcatcacttttatggcaatcgggttgtcgtttgtttctgtaccgtta
atgctgattatttgtggcacgctgttggcgttgctgctaattattcctacggttttttat
cgactagggctgaagctcggcaaaaaagcggtgcaaagccgagccaattaccgcagccaa
tttattgagtgggtgcaactgaatgcggaatttttgctgttcggcaatttacgccaagcg
gctgagaaattacaacataccgagcgagagtggctgaatgcacaaggtcaggaaagccga
ctttccgggctttcaagcggtttattaatgctttcaaacggtgttttaacttgtgttgtg
atctatttagtttctaccgcaattaatgtgccgactgctcaatatcctgaagccttaatt
gcattggtggttttctgtgtaatggcgtccaacgaaattttagcccctatcggcattgcg
tttttgcatttagggcaagtgattactgctgcagaacgtattaatgaaattaccgaacag
cagcccaacgtgaaatttaacggttcggcaaaatggcaaaatttgagccaaaatcaaccg
cttgtacgttttgaaaatgtgaattttgcgtatttgaatggtgagcagcaggtattaaat
aatctctcttttgaagtattaaaagggcaaaaggttgcgattttgggtaaaacagggagc
ggaaaatcaaccattttccaattattaaaccgcaattatgacccagcaagcggtcaaatt
tggttaaataattgcaaaattgaatatttcccggaacaaacgttacgctcaaaattagtt
acacttagccaacgagtgcatatttttagccaaacactcaaagataatttattaatgggc
aatgcaacagcgaccgatgagcaaatgatcgaagtcgttcaaaaagtgggcttaggttac
ttactcgaaacagaaggattaaaactttggctcggcgagggtggaagaccgctttccggc
ggtgaacaacgccgtttagggcttgcccgtttgctattaagttcagccgaattagtgtta
ctagatgaaccaaccgaagggctagatcgtgaaaccgagcagcagatcttaaatctcatt
ctaacccactgtgcagaaagaacattgctgatgattacccacaggcaaagcggcttagat
aaatttgatgtagtttatcgaatggatagtggaaggttgttgaattaa
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