Mannheimia varigena USDA-ARS-USMARC-1296: X808_12590
Help
Entry
X808_12590 CDS
T03027
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvi03400
]
X808_12590
DNA repair and recombination proteins [BR:
mvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
X808_12590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_16
AAA_22
ResIII
FtsK_SpoIIIE
CbiA
SLFN-g3_helicase
TrwB_AAD_bind
AAA
AAA_30
T2SSE
SRP54
P-loop_TraG
AAA_7
AAA_6
nSTAND3
Hydrolase
AAA_19
Zeta_toxin
AAA_5
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AHG75782
UniProt:
W0QBX0
LinkDB
All DBs
Position
complement(1343653..1345143)
Genome browser
AA seq
496 aa
AA seq
DB search
MGLYNIAQTESGKVISLNAKMANRHGLVAGATGTGKTVTLRKLAEAFSDDGVPVFLVDVK
GDLSGLVQAGSFSGKIAERIEMFNLGGEDYLNGYPVSFWDVFGESGIPLRTTISEMGPML
LSRLLNLNDTQEGLLNLVFRVADDRGLLLIDLKDLRALLKFVADNAKVFQVEYGNVSAAS
VGAIQRALLRLENEGADKLFGEPALDLHDWIQTRNGRGVINILNSEKLINSPRMYGAFLL
WFMAELFENLPEVGDPEKPKFVLFFDEAHLLFDDAPKALVDKIEQVVRLIRSKGVGVYFV
TQNPLDLPDSVLGQLGNRIQHALRAFTPRDQKAVKSAAETFRANKEVNVVEAITQLGVGQ
ALVSVLDEKGMPTPVEIAYIYPPKSQLAPLATGERDALVKQDDLYHHYSQYVDNESAFEL
LNAKAEQVKAEQAAAEEENNDFLGGIISSIFGSKKKKDQSITEQVVSQVAHSVGRNLRNQ
VTKQIMRGILGAITKK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggggttatataatattgctcaaacagaatcgggcaaagtcatctcacttaacgcaaaa
atggcgaaccgacacggtttagtggcgggggcaaccggtacaggtaaaactgttacgtta
cgaaaattagcggaagcctttagtgatgatggtgtgccggtgtttttagtggatgtcaaa
ggcgacctttcaggcttggtacaagcgggcagtttttctggaaaaattgcagaacgcatt
gagatgttcaacttaggtggagaggattacttaaacggttatcctgtctcattttgggac
gtgtttggtgaatcgggcattccgcttcgcaccacgatttccgaaatgggaccgatgcta
ctttcccgtttacttaacttaaacgatacccaagaaggtttattaaatcttgttttccgc
gtagcagatgatcgtggattgctgttgattgatttaaaagatttgcgtgccttacttaaa
tttgtggcagataatgcgaaagtattccaagtggaatacggcaatgtatcagcagcaagt
gtaggagctatccaacgtgcattattaaggcttgaaaatgaaggggcggataagttattt
ggcgaacctgcgttagatctacacgattggattcaaactcgtaacggacgtggtgtaatc
aatattttaaattctgaaaaattgattaactcgccaagaatgtatggtgcattcttactg
tggtttatggcagaactgtttgaaaatttacctgaagttggcgatcctgaaaaaccaaaa
tttgtgcttttctttgatgaagctcatctattatttgatgatgcccctaaagcattagta
gataaaattgaacaggtggttcgcttaattcgttcaaaaggcgttggggtttattttgtt
acgcaaaacccactcgacttgcccgattctgtgctagggcagctcggtaatcgtattcaa
cacgccttgcgagctttcacgcctcgtgatcaaaaagcagtgaaatcagcggcggagact
ttccgtgccaataaagaggtaaatgtggtagaagcgattacccaacttggagtagggcaa
gcattggtttcggtgctagatgaaaaaggtatgccaacccctgttgaaattgcttatatt
tatccaccgaaaagccagttagctccattggcgacaggcgaacgtgatgccttagtgaag
caagatgatttgtatcatcactacagtcagtatgtagataatgaatctgcgtttgaattg
cttaatgctaaagctgaacaagtgaaagccgagcaagctgcagcggaagaagaaaataat
gatttcttaggtggcattatctcttcaatttttggttcgaagaagaaaaaagatcaatct
attaccgagcaagtggttagccaagtggctcattcagttggtagaaatttacgcaaccaa
gtaaccaagcaaattatgcgtggcattttaggggcgattactaaaaagtaa
DBGET
integrated database retrieval system
