Mannheimia varigena USDA-ARS-USMARC-1296: X808_1340
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Entry
X808_1340 CDS
T03027
Name
(GenBank) Alpha-hemolysin translocation ATP-binding protein HlyB
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi02010
ABC transporters
mvi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
X808_1340
03070 Bacterial secretion system
X808_1340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvi02000
]
X808_1340
02044 Secretion system [BR:
mvi02044
]
X808_1340
Transporters [BR:
mvi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
X808_1340
Secretion system [BR:
mvi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
X808_1340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
nSTAND3
AAA_22
MeaB
DUF87
AAA_16
AAA_21
RsgA_GTPase
AAA_18
PRK
AAA_30
NB-ARC
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AHG74661
UniProt:
W0Q804
LinkDB
All DBs
Position
138618..140744
Genome browser
AA seq
708 aa
AA seq
DB search
MEANPQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSLTAWLLAAKSLALKAKL
IKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYDLEKDTPQILSRDEFEACYQ
GQLILVTSRASVVGQLAKFDFTWFIPAVIKYRKIFLETLIVSIFLQIFALITPLFFQVVM
DKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYIFAHSTSRIDVELGAKLFRHLLSLP
ISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMWYYSPKLTLVVLG
SLPCYILWSIFISPILRRRLDDKFARSADNQSFLVESVTAINMIKAMAVTPQMTDTWDKQ
LASYVSSSFRVTVLATIGQQGVQLIQKTVMVINLWLGAHLVISGDLSIGQLIAFNMLSGQ
VIAPVIRLAQLWQDFQQVGISVTRLGDVLNSPTEQYQGKLSLPEIQGDIAFKNIRFRYKP
DAPTILNNVNLEIKKGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPN
WLRRQIGVVLQDNVLLNRSIRENIALSEPGMSMERVIYAAKLAGAHDFISELREGYNTIV
GEQGTGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMKNMQKICQGRTVIL
IAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNNNGLYSYLHQLQLN
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaatcctcaaaggaatgatcttggtttagtcgctctcacgatgttagcacaa
tatcataatatttcgcttaatccagaagaaataaaacataaatttgatcttgatggaaaa
gggctttctttaaccgcttggcttttagctgcgaaatcgttagcgttgaaagcaaaactt
attaaaaaagagatttctcgcttacatttggttaatttacctgccttagtttggcaagat
aacggtaaacattttttattggtaaaagtggataccgataataaccgctatttaacttac
gatttggaaaaagatacaccgcaaattttatcacgagacgagtttgaagcttgctatcaa
gggcagttaattctggttacttccagagcctctgtcgtggggcagttagcaaaatttgat
ttcacctggtttattcctgctgtgatcaaataccgaaaaatcttcctagaaactttgatt
gtttctatctttttgcaaatttttgccctaattacaccgctattcttccaagtggtaatg
gataaagtattggtacatcgaggtttttcaaccttgaatatcattactgttgccttagct
attgtgatcatatttgaaattgtattaagcggtttacgaacctatatttttgcccacagt
accagccggattgatgtggaattaggggctaaattatttcggcatttgttatcgctacct
atttcttattttgagaacaggcgagttggcgatacggttgcacgggttagagaattagat
caaattcgaaattttcttaccggacaagcattaacttcagtcttggatttactgttctct
tttatcttttttgcggtgatgtggtattacagcccgaaattaactctagtagttctcggc
tcattaccctgctatattttatggtcgatttttattagtccgattttaagacgacgttta
gacgataaatttgctcgaagtgctgataaccaatcattcttggttgaatcagtaactgct
atcaatatgattaaagctatggcggttactccacaaatgaccgatacgtgggataaacaa
ttggcaagctatgtttcatcaagcttccgtgtaaccgtattggcgactattgggcaacag
ggtgtgcaacttattcaaaaaactgtaatggtaatcaacctttggttgggagcacactta
gttatttcaggcgatcttagcataggacaattaattgcctttaatatgctttccgggcaa
gtgattgcaccggtaatccgcttggcacaactctggcaagatttccaacaagttggtatt
tctgttacacgtttaggtgatgttttaaattccccgaccgaacaatatcaaggaaaatta
tcactacctgaaatacaaggcgacatcgcgtttaaaaatattcgttttagatataaaccg
gatgctcctacgattttaaataatgtgaatttagagattaaaaaaggggaagtaatcggg
attgttgggcgttcaggctcaggcaaaagtacattaacaaaattactgcaacgtttttat
attcctgaaaacggccaggtgcttattgacgggcacgatcttgcattagctgacccaaac
tggctacgccgtcaaatcggggtagttttgcaagataacgtcctgttaaaccgtagtatc
cgagaaaatatagccctatccgaaccgggaatgtcaatggaacgtgtgatttatgcagca
aaattagctggtgctcatgatttcatttcagagctacgtgaaggttataacactattgtt
ggtgaacaaggcacagggctttccggaggacagcggcaacggattgcgattgcacgagct
ttagtgaacaaccctaaaatcctgatttttgatgaagcgactagtgctctcgattacgaa
tctgaacatattattatgaaaaatatgcaaaaaatatgccaaggaagaaccgtgattttg
attgcacatcggttatcaacagtcaaaaatgccgaccgaattattgtgatggaaaaaggg
gaaattgtagaacaaggtaagcatcacgaattgctgcaaaacaataacgggctttactcc
tacttacatcaattacaactgaattaa
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