Mannheimia varigena USDA-ARS-USMARC-1296: X808_14430
Help
Entry
X808_14430 CDS
T03027
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mvi03012
]
X808_14430
Translation factors [BR:
mvi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
X808_14430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
MMR_HSR1
AAA_29
ATP-synt_ab
RsgA_GTPase
ABC_tran_CTD
KAP_NTPase
MeaB
DUF1283
Motif
Other DBs
NCBI-ProteinID:
AHG75965
UniProt:
W0QDM5
LinkDB
All DBs
Position
1537120..1539054
Genome browser
AA seq
644 aa
AA seq
DB search
MIFFTDLILKRGHSVLIENSSATIHTGQKVGLVGKNGCGKSSLFALLKNELQPEGGEVSL
PKNWAISWVNQETPALEISALDYVIQGDREYTKLMAELDEANAKDDGNRIATIHAHLDTI
DAWTIQARASTLLNGLGFSTEQLQLPLKSFSGGWRMRLNLAQALICRSDLLLLDEPTNHL
DLDAVIWLERWLTNYRGTLLLISHDRDFLDPIIDRVIHIEHQKLNEYTGNYTSFEIQRAT
KISQQNAAFQQQQRKVAHLQSFIDRFKAKATKAKQAQSRIKALEKMELIAPAYADSPFEF
EFRPPLALPSPLLMMEKVSAGYGEKTVLESVKLNLVPGSRIGLLGRNGAGKSTLIKLLAG
EIPPQNGNVQLAKGVQLGYFAQHQVDTLRFEESPLWHLQKIAPEKTEQELRNYLGGFDFK
GDKVVQEVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLEMRQALVDALTYYEGSL
VVVSHDRHLLRRTVNEFYLVHDRKVEEFKGDLDDYQKWLNEQNALANEPKSVLAKNSENA
TACEPTANENSAANRKEQKRLEAELRQQTAPLRKKITQLEKELEKATEKLNKLEEMLGDS
QLYDAENKAKLTETLAQQVETKKQVEEIEMQWLEAQETLEVMLG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgatattttttacagatttaattttaaaacgtgggcattccgtcctaattgagaacagc
tctgcgactatccacacagggcagaaagtcggtttagtcggcaaaaacggttgtggtaaa
tcctcgctttttgcgttgttgaaaaacgaattacagcccgaagggggcgaggtttcgctg
ccgaaaaactgggcgatttcgtgggtaaaccaagaaacaccagcgttggagatttccgct
ttggattatgttattcaaggcgaccgtgaatacaccaaattaatggcagagcttgatgaa
gcgaatgccaaagatgatggcaaccgcattgcgaccattcacgctcatctcgacaccatt
gatgcgtggacgattcaagctcgagcttctaccctgttgaacggtttaggctttagcacc
gaacaactccaactgccgttgaagtctttttcgggcggttggcgtatgcggttgaacttg
gctcaagccctgatttgccgttctgatttgttattactggacgagccgaccaaccactta
gatttagatgccgtgatttggctcgaacgctggctcaccaactatcgtggtacgttatta
ctgatttcccacgaccgtgattttcttgatccgattattgaccgtgttattcacatcgaa
catcaaaaactcaatgaatacaccggcaattacacctcgtttgaaattcagagagcgacc
aaaatttcgcaacaaaatgccgctttccagcaacagcaacgcaaagttgcccatttacag
agctttattgatcgctttaaagccaaggccaccaaggcgaaacaggctcaaagccgtatt
aaagcgttggagaaaatggagcttatcgccccggcttatgcagattcaccgtttgaattt
gagttccgtccaccgcttgccctgcctagcccattgctgatgatggaaaaagtgagtgcc
ggatacggtgaaaaaaccgtgttggaatcggtgaagctcaatttagtgccgggttctcgc
attggtttgctcgggcgaaatggggcggggaaatccacgctgattaaattactggcaggt
gaaattccgccgcaaaacggcaatgtgcaactggcaaaaggcgtgcagttgggctatttc
gcccagcaccaagtggatacgctccgctttgaagagagtccgctttggcatttgcagaaa
atcgctcctgaaaaaaccgagcaagaactgcggaattatttgggtgggtttgatttcaaa
ggcgataaagtggtacaagaagtcaaatcattttcaggtggagaaaaagcccgtttggtt
cttgccttaattgtatggcaacgtcccaatcttctgttactagacgaaccgaccaaccat
ttagatttagagatgcgacaagctcttgttgatgctctgacgtattatgaaggatcgctg
gtagtggtttcgcacgaccgtcatttgctgcgtagaaccgtgaatgaattttatttggta
cacgaccgaaaagtagaagaatttaaaggcgacttggacgattatcaaaaatggttgaat
gagcaaaatgccttagcgaatgagccgaaatcggtacttgcaaaaaattcggaaaatgca
accgcttgtgagccgacagccaatgaaaacagtgcagcaaaccgcaaagagcaaaagcgt
ttagaagccgaactccgccaacaaaccgccccgctacgtaaaaaaatcacgcagttggaa
aaagaattggaaaaagccactgaaaaactgaataagttagaagaaatgcttggtgatagc
cagctctacgatgcagaaaataaagccaaactcaccgaaacgctcgcccaacaggtcgag
acaaaaaagcaggtggaagagattgaaatgcaatggctagaggctcaggagacattagag
gtaatgttaggctaa
DBGET
integrated database retrieval system
