Mannheimia varigena USDA-ARS-USMARC-1296: X808_14830
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Entry
X808_14830 CDS
T03027
Name
(GenBank) ClpB protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mvi03110
]
X808_14830
Chaperones and folding catalysts [BR:
mvi03110
]
Heat shock proteins
HSP100
X808_14830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_14
nSTAND3
RuvB_N
ATPase_2
AAA_24
TniB
bpMoxR
NBD_SMAX1
AAA_7
IstB_IS21
NACHT
DUF815
AAA_25
AAA_19
Torsin
Motif
Other DBs
NCBI-ProteinID:
AHG76005
UniProt:
W0QDR3
LinkDB
All DBs
Position
1572609..1575176
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AA seq
855 aa
AA seq
DB search
MNFEKMTTKLQEALAESQSLAVGKDNPYIEPAHLLYALVKQDGGSVAPLFTALNINVQTL
ISELQAILDRLPQVQGGNTQVSQQLVRLLNQSDKLAQQFGDSFISSELFVLASVEDNGDL
GKLWKKFGLSKEKLTQAISQIRGGETVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIG
RDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDM
GALIAGAKYRGEFEERLKAVLKELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPS
LARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHH
VQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQL
KLERQALQKEEDEASRQRLAKLDEEMAAKEREYSELEEIWKAEKSALLGTQHIKEELENA
RIAMDQARRENNFEKMSELQYGVIPNLEKQLQAVENGEKNAEAQLLRTKVTEEEIAEVLS
KATGIPVSKMMEGEKEKLLRMEEVLHARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSF
LFLGPTGVGKTELSKTLAHFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGY
LTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG
SHLIQENAHKGYDAVKEMVMEVVGHHFRPEFINRIDETVMFHSLGKDHIRSIAKIQLQRL
ITRLAERGYSLTVTDAALDHIGNAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNK
PVTVDYQDGTIVATQ
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgagaagatgaccacaaaactgcaagaagcgttggcagagtcccaatcgctt
gcggttggaaaagataacccttatatcgaacctgcccatttactatatgcgttagtgaaa
caagatggcggttctgttgccccactctttacagcattaaatatcaatgtgcagaccttg
attagcgaattgcaagccattttagaccgcttgccgcaagtgcaaggtggaaacacacag
gtttcacaacaattagtgagattgttaaatcaatcagacaagttggcacagcaatttggc
gatagctttatttcctctgaattgtttgtgttggcatctgttgaagacaatggcgactta
ggtaaattatggaaaaaatttggcttaagcaaagaaaaactcacacaagcaatcagccaa
attcgaggaggagaaaccgtgaataatcaaaacgcagaagaaacccgtcaagcattgcaa
aaatataccattgatttaaccgagcgagcgaaagccggcaagttagatcctgttatcggg
cgtgatgaagaaattcgccgtgcagtgcaagtattacaacgccgcaccaaaaataaccca
gtgcttatcggcgaaccgggcgtgggtaaaacagcgattgtagaaggcttggctcaacgt
attgtcaatggcgaagtgcctgaaggtttgaaaaacaagcgtgtgctatcgctcgatatg
ggggcgttaattgccggggcgaaataccgtggcgaatttgaagaacgtttaaaagcggtg
ctaaaagagcttgccaaagaagaggggcaagtgattttattcattgatgaaatccacaca
atggtcggtgcaggtaaaacagacggtgcaatggatgccggcaacctgctcaaaccgagc
cttgctcgaggcgaattacactgcgttggggcaactactcttgatgaatatcgtcaatac
attgaaaaagatgcggctcttgaacgccgtttccaaaaagtgttagttgatgaaccgacg
gtggaagatactattgcaattttgcgtggtttgaaagagcgttatgaaatccatcatcac
gttcaaattaccgacccagccattgtggcagcagcaacactttcgcaccgttatgtatct
gaccgccaattaccagataaagcgattgacttgattgatgaagcagcttcaagtctgcgt
atggaaattgattccaaacctgagccgttggataaattagaacgccgtattattcagctc
aaattggaacgccaagcgttacaaaaagaggaagatgaagccagccgtcaacgtttagcg
aaattagacgaagaaatggcagccaaagagcgtgaatattcggagctggaagaaatttgg
aaagcggaaaagtccgccttgcttggcacgcaacacattaaagaagagttggaaaacgct
cgcattgcgatggatcaagctcgccgtgaaaacaacttcgagaaaatgtctgagttgcaa
tatggtgtgattccaaacttagaaaaacagttacaagcggtcgaaaatggagaaaaaaat
gcagaagcacaactacttcgcaccaaagtaactgaagaagaaattgcggaagtgctttca
aaagcgactggcattcctgtttctaagatgatggaaggcgagaaggaaaaactccttcgt
atggaagaggtattgcacgctcgtgttatcgggcaaaatgaagcggttgatgcggtggca
aatgcgattcgccgtagccgtgcagggctttctgatccgaataaaccgattggttcgttc
ttatttttaggtccgaccggcgtgggtaaaacggaattaagcaaaacattagcccacttc
ttgtttgatgaccctgatgcaatggtgcgtattgatatgtctgagtttatggaaaaacac
agcgtgtctcgcttggtgggagctcctccgggctatgttggttatgaagaaggaggttat
ttaaccgaagcggttcgccgccgtccttattctgttgtattacttgatgaagtggaaaaa
gcccaccctgatgtgtttaacattttactgcaagtgttagatgacggacgtttaacggac
gggcaaggcagaacggttgatttccgcaataccgttgtaattatgacctcaaacttaggc
tcacatctcattcaagagaatgcacataagggctatgatgcggttaaagagatggtaatg
gaagttgttggacaccatttccgccctgaattcatcaaccgcattgatgaaacggtaatg
ttccactcgttaggaaaagaccatatccgctcaattgcgaaaattcagctacaacgctta
attactcgcttagcagaacgtggttatagcctaaccgtaaccgatgcagctttagatcat
atcggcaatgcaggctttgacccattgttcggtgcaagaccacttaaacgtgcaattcaa
caagagcttgaaaatccacttgctcagcagattttaagcggtaaattattaccaaataaa
cctgtaacggtggattaccaagacggcactattgtggcaacgcaataa
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