Mannheimia varigena USDA-ARS-USMARC-1296: X808_15110
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Entry
X808_15110 CDS
T03027
Name
(GenBank) CcmA protein
KO
K13926
ribosome-dependent ATPase
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99974 Translation
X808_15110
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
ABC2_membrane
AAA_21
ABC2_membrane_2
AAA_29
AAA_22
RsgA_GTPase
AAA_14
ABC2_membrane_4
AAA_25
ATP-synt_ab
RecA_N
DUF6334
Motif
Other DBs
NCBI-ProteinID:
AHG76033
UniProt:
W0QFK8
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All DBs
Position
complement(1605310..1608045)
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AA seq
911 aa
AA seq
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MTELAVKISHLRHAYKNTVAVDNVSLEIPKGRTVGLIGPDGVGKSTLLSLIARVKILQQG
EILVFGLDVSKAKDRDILTHKVAFMPQGLGKNLYLTLSIYENIDFHARMFGLSPSQRKAR
IHRLLKATGLLPFADRAAGKLSGGMKQKLSLCCALVHSPELLILDEPTTGVDPLSRRQFW
ELVEELRVETPDMTVIIATAYIDEAEGFEYVMAMDDGKLIVDKPTQAVIAETGSQNLEEA
YIKLLPPEKRGAVDGLIIPPFEPLKDEPPVIVAEGLTKKFGDFVSVDNVSFVIPKGEIFG
FLGSNGCGKSTTMKMLTGLLEPTEGLALLLGQPIDASNIDTRKRVGYMSQAFSLYEELTV
RENLELHAKLYQIPRSEWSHYVNNVMGQFDLADLAEEKPLSLPLGIRQRLQLAAACLHKP
EVLILDEPTSGVDPAARDMFWEYLIKLSREDRITIFVTTHFMNEAARCDRISFMHRGKVL
GVGTPEELRQGKNAKTLEEAFIIYLEEQNDEVTAPKETVETDEQENSSLQAVKNQQFFAN
GLSVIWTFAVREGKELLRDNIRLLFALLGPLVMLLAMGSSISFDIRPLNFTVLDHDNSSE
SRKLIEAFSGSPYFIRQDNIYSIEDINPSLQTGKAKLVLEIPSDFGRDLLAQRMPEVGIF
IDGAFPSTAENLRGSAQGVIGQYMQEMLRENGISANMPSVTEPRMIYNQDFKSVFAMTPG
IIMLAMMLVPPMMTALSVVREKEMGTIMNLYGSPASQFQFLLGKQLPYIALSFISYLIMV
LAAIFVFGVPIKGSITAMFLGVLLAICASTGFGLLVSSFVKSQVAAIFAAAIISIVPTIN
FSGMMYPVSRLDENVQLVSKIFPGAWFQQISLGGFTKGLGFADFLQPYLALAVIYAVYLA
LATFALKKQEK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacttgcggttaaaattagccatcttcgccatgcttataaaaatactgtagcg
gttgataatgtttcacttgaaattccgaaaggcagaacagttgggcttattggccctgat
ggtgtgggtaaatctacgctactttcgctgattgccagggtaaaaattctccaacaaggg
gagattctggtgtttgggctagatgtatcaaaagccaaagaccgagacatcttaacccac
aaagttgcatttatgccgcaaggtttagggaaaaacctttatcttaccctttctatttac
gaaaatattgatttccatgcccgaatgtttggactctctccaagccagcgaaaagcacgt
attcatcgtttgctaaaagcaacggggctgttaccgtttgccgatagagcagcaggcaaa
ttatcaggtggaatgaagcaaaaactcagtctttgctgtgcgttggtgcatagccctgaa
ttactgattttagatgagccaacaacaggggtagatccactttcacgtcgccaattttgg
gaattagtcgaagaattgcgtgttgaaacaccagatatgacagttatcatcgccaccgcc
tatattgatgaagccgaagggtttgaatatgtaatggcaatggacgatggcaagctaatt
gttgataaaccaactcaagctgttattgctgaaacaggcagccaaaatttagaagaagcc
tatatcaaattattgccacctgaaaaacgaggggcagtagatggcttgattatcccacct
tttgagccattaaaagatgagccacctgttattgtggcggaaggtttaaccaagaaattt
ggcgattttgtttcagtagataatgtgagctttgtaattccgaaaggtgagatttttggc
tttttaggctctaacggctgtggaaaatccaccacaatgaaaatgctaaccggtttgctg
gagccaaccgaaggcttggcattactgcttgggcagccgattgatgcgagtaatatcgac
acccgaaaacgggttggctatatgtcgcaggcattttcactttatgaagaactgactgtg
cgtgaaaatcttgaattgcacgccaaactgtatcaaattccacgcagcgagtggtcgcat
tacgttaataatgtaatgggccaatttgatcttgccgatttagctgaagaaaaaccgtta
tctttgccgcttggtattcgccagcgcttacagcttgcggctgcttgtttgcataaacct
gaagtgttgattttagatgaaccgacttcgggagtggacccggcagctcgtgatatgttt
tgggagtatttaattaaactttccagagaagatcgtattaccatttttgttactacccat
tttatgaatgaagcggctcgttgtgatcgcatttcttttatgcacagaggaaaagtactt
ggcgttggtacacctgaagaattaaggcaaggtaagaatgcgaaaacacttgaagaagcc
tttattatctacttagaagagcaaaacgatgaagtgactgccccgaaagagacggttgag
actgatgagcaagaaaatagctcattacaagcggtcaaaaatcagcagttttttgcaaat
gggctgagtgtcatctggacttttgccgtgcgtgaaggaaaagaactgttaagagacaat
atacgtttactatttgctttgcttgggccgttggtcatgctgctggcgatgggttcaagt
atttcttttgatatcagacctttaaattttaccgtgcttgatcacgataatagctcggaa
agccgtaaattgattgaagctttttccggttcgccttattttattcggcaagataatatt
tattcgatagaggatataaaccccagcctccaaacaggcaaagcaaagctggtattagaa
attccgtctgatttcgggagagatctattagctcaaagaatgcctgaggtcggtatattt
attgatggagctttcccaagcaccgcagagaatttacgaggttctgcacaaggcgttatc
gggcaatatatgcaggaaatgttaagagaaaatggcattagtgcgaatatgccttctgta
actgaacctcgaatgatctataaccaagatttcaaaagtgtgtttgcgatgacacctggc
attattatgcttgcgatgatgcttgtgcccccaatgatgaccgcacttagcgtagtcaga
gagaaagagatgggaacgattatgaacctctacggatcgcctgcttctcaattccagttt
ttgttaggcaagcagcttccttatattgcactttcatttatcagctatttaattatggta
ctggcggcaatttttgtatttggggtgccgattaaaggctcgataaccgcaatgttctta
ggtgtgttattggcaatttgtgcttcaactggctttggcttattggtgtctagctttgtg
aagtcgcaagtcgccgctatttttgccgccgcaattatttcaattgtaccgacgattaat
ttctcgggaatgatgtatccggtttctcgtttagatgaaaatgtgcagctggtttcaaag
attttccctggggcttggttccagcaaatcagcttaggtggatttaccaaaggacttggc
tttgccgatttcctccagccttacttggcactcgcagttatttacgccgtttatcttgca
ttagcaacttttgcgttgaaaaaacaggagaaatag
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