Mannheimia varigena USDA-ARS-USMARC-1296: X808_15830
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Entry
X808_15830 CDS
T03027
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvi03032
]
X808_15830
03400 DNA repair and recombination proteins [BR:
mvi03400
]
X808_15830
Enzymes [BR:
mvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
X808_15830
DNA replication proteins [BR:
mvi03032
]
Prokaryotic type
DNA Topoisomerases
X808_15830
DNA repair and recombination proteins [BR:
mvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
X808_15830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Peptidase_M13_N
ApbA
Motif
Other DBs
NCBI-ProteinID:
AHG76103
UniProt:
W0QFR9
LinkDB
All DBs
Position
complement(1690620..1693310)
Genome browser
AA seq
896 aa
AA seq
DB search
MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQNSNTYN
KPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAM
RYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT
NIPPHNLGEVLDGCLAYIENENISVEELMAHIPGPDFPTGAIINGRKGIEEAYRTGRGKV
YVRAKASVETTDKGREQIVVTELPYQVNKAKLIEKIADLVKEKKIEGISKIDDYSDKKGI
SIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMVALDNGQPKVLNLRQIIEAFVKHRREV
VTRRTIFELRKARERAHILEGLAIALANIDPVIELIRASKTAEEAREGLLARPWALGNVA
PMLEAAGVGASRPEDLPENLGVRDGEYYLSEAQARAILELRLHRLTGLEHEKIVEEYKEL
LTEIGELLRILNSADRLMEVIREELELVKATFNDERRTEITAASGDINIEDLIAQEDVVV
TLSHAGYVKYQPLSDYEAQRRGGKGKSATKMKEDDFIEKLLVANTHDTILCFSSRGRLYQ
LKVYQLPQASRGARGTPIVNILPLVKEENERITAILPIPNGEFSADKFIFMATASGVVKK
VSLDAFSNVRSSGLIALKLREGDELIGVDITDGESEIMLFSAQGRVVRFAEKAVRAMGRT
ATGVRGIKLATTEISAEEIEEAEIIEIENEEAEDSTSVSLDTDRVVSLVIPRTEGDILTV
TQNGYGKRTVIGEYPVKSRATKGVVSIKVNERNGKVVAAVQVEETDQIMLITDAGTLVRT
RVAEVSLVGRNTQGVRIIRTAEDEQVVSLERVCEPEEDDETTEAFDAETVETSTEE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattagccaaagatattattcccgtaagtattgaggacgaattaaaaacctct
taccttgactacgcaatgtcggtgattgttgggcgtgcattgcctgatgtgcgtgacggc
ttgaaaccggttcaccgccgtgtgcttttctcaatggatcaaaacagcaacacctataac
aaaccacacgtgaaatcagcccgtgtggtgggggatgtgatcggtaaataccacccgcat
ggtgattctgcggtgtacgacaccattgtgcgtatggctcagccgttctcacttcgttat
atgttagtggacggtcaaggtaacttcggttctatcgatggcgatgctccggcggcaatg
cgttataccgaagtgcgtatgcagaaaattacgcaggaattgctcactgatttagacaaa
gaaacagtagatttctcgccaaactatgacggcaaagagatgattcctgatgtgttgcca
acaaaaattccagccttgttagtgaacggttcatcggggattgcggtgggtatggcaacc
aatattccgcctcacaatttaggcgaagtgttagacggctgcttggcatacattgaaaat
gaaaatatcagcgtggaagagctaatggctcacattcccggcccggatttccctacaggg
gcgattattaacggtcgtaaagggatcgaagaagcctaccgtaccggtcgtggcaaggtg
tatgtgcgtgcgaaagcgagcgtagaaaccaccgacaaagggcgtgagcagattgtggtg
actgaacttccataccaagtcaataaagcgaaattgatcgaaaaaatcgccgatttggtg
aaagagaagaaaatcgaaggcatcagcaaaatcgatgactattccgacaaaaaagggatc
tcgattgttattgaagtcaaacgtgatgcagtgggcgaagtggtgttaaatcacctctat
tctttaacccaaatgcaagtgaccttcggtatcaatatggtggcgttggacaacggtcag
ccgaaagtgttgaacctccgccaaatcattgaagccttcgtgaaacaccgccgtgaagtg
gtgactcgccgtaccatttttgaactacgcaaagcccgtgagcgtgcccatattttagag
ggcttggcgattgcgttagcgaatatcgaccctgttatcgaattaatccgtgcctccaaa
accgctgaagaagcccgtgaaggcttgcttgctcgcccttgggcattaggcaacgtagcc
ccaatgttggaggctgccggcgtaggtgcttctcgcccggaagatttgcctgaaaactta
ggcgtgcgtgatggcgaatactatttatctgaagcccaagctcgtgcgattttagagtta
cgcttacatcgcttaaccggcttagaacacgaaaaaatcgttgaagagtataaagaatta
ttaaccgaaatcggcgaattattacgcattttaaacagtgcagatcgcttgatggaagtg
atccgtgaagagttagagttagtgaaagcgacctttaacgatgaacgccgcacagaaatt
accgcagcctcaggcgacatcaacattgaagatttaatcgctcaagaagatgtggtggta
acgctttctcacgcaggctatgtgaaatatcagccgctttcagactacgaagcccaacgc
cgtggcggtaaagggaagtcggcaaccaagatgaaagaagatgatttcatcgaaaaatta
ttggtggcgaatacccacgacaccattctctgcttctcaagccgtggtcgcttatatcaa
ttaaaagtgtaccaattaccgcaagccagccgtggggcaagaggcacgccgattgtgaat
attctgccgttggtgaaagaagagaacgagcgtattaccgcaatcctgccgattccaaat
ggcgaatttagtgccgataaatttatctttatggcaactgcaagcggcgtggtgaaaaaa
gtctcgctcgatgcgttcagcaacgttcgttcaagcggtctaattgcattaaaacttcgc
gaaggcgatgaattaatcggtgtggatattaccgatggcgagagcgaaattatgctcttc
tcggcacaaggtcgagtggttcgcttcgcagaaaaagctgtgcgtgcaatgggacgtacc
gcaacaggggtgcgtggtattaaacttgcaacgactgaaatttcagcagaagagatcgaa
gaagctgaaatcatcgaaattgaaaatgaggaagcggaagattcaacaagcgtgagccta
gacaccgaccgtgtggtttctcttgtgattcctcgcactgaaggcgatattctgactgta
acccaaaacggctacggtaaacgtaccgtcattggcgaatatccggtgaaatcccgtgca
accaaaggggtagtgtcaatcaaagtgaacgaacgcaacggtaaagtggtagctgcagtt
caagtggaagaaaccgaccaaattatgctgattaccgatgccggcacgctagttcgcact
cgagtggcggaagtgagcttagttggacgaaatacccaaggcgttcgcattatccgcacc
gcagaagacgaacaggttgtgagcctagagcgagtttgcgaaccggaagaggacgatgaa
acgacagaagcattcgatgcggaaaccgtagaaacctcaaccgaagaataa
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