Mannheimia varigena USDA-ARS-USMARC-1296: X808_16940
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Entry
X808_16940 CDS
T03027
Name
(GenBank) HTH-type transcriptional regulator CysB
KO
K13634
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvi03000
]
X808_16940
Transcription factors [BR:
mvi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
X808_16940
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Ortholog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AHG76214
UniProt:
W0QBG9
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Position
complement(1804775..1805758)
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AA seq
327 aa
AA seq
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MKLQQLRYIVEIVNQNLNITEAAEVLYTSQPGISKQVRLLESELGVNIFERNGKHVKGLT
PAGEKIVAIARELLVKAQSIKSVAEEQTRPNKGVLRIATTNTQARYMLPEVIEKFKARYP
EVSLHLHQGSPNQIYDALMAGEVDLAITTEAQYLFEEAILLPCYWWNRSVIVKPDHPLAT
FVNQSRDLTVEELGKYDLITYTFGFTGQSDLDHAFNKEGILPNIVFTATDADVIKTYVRL
GLGVGIMAAMAHTEADKDLVAINASHLFQPSMTQIAFKRGTFLRNYMYDFINYFSPHLTR
VQVEKAEQLRDNNAISRLFERVSLEEK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacagcagctacgttacattgtggagatagtaaaccaaaatttgaatattact
gaagccgcagaagtgctttatacatcccaaccgggcattagtaagcaggttcgcttatta
gaaagtgagttaggggttaatatttttgaacgtaacggtaagcacgttaaaggattaaca
cctgcaggtgagaaaatcgtagccattgctcgtgagttattggttaaagctcagagtatt
aagtctgtagcagaagagcaaactcgcccgaataaaggcgttttacgcattgcgacaact
aatactcaagctcgttatatgttgcctgaagtcattgaaaagttcaaagctcgttatccg
gaagtaagtttgcatttgcatcaaggttcgccaaaccaaatttatgatgcgttaatggca
ggcgaggtggatttggcgattactactgaggctcaatacctgtttgaagaggcgattttg
ttgccgtgctactggtggaatcgttcagttattgttaaaccggatcacccattggcaact
tttgtgaaccaaagccgagatttaactgtcgaagaactaggtaaatatgatttgatcacc
tacacctttgggtttacggggcaatcagatttagatcacgcattcaataaagaaggaatt
ttgccaaatattgtgtttaccgcaaccgatgcagatgtgattaaaacttatgtccgttta
ggtttaggggtgggaattatggcagcaatggcacatactgaagcagataaagatttagtc
gcaatcaatgcaagccatttatttcagccaagtatgactcaaatcgcatttaaacgaggg
acattccttcgtaattatatgtatgattttattaattatttttcgccacatttaacacga
gtgcaagtggagaaagccgaacaattacgagataacaatgcaatctcaagattgtttgaa
cgtgtatctttagaggagaagtag
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