Mannheimia varigena USDA-ARS-USMARC-1296: X808_18710
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Entry
X808_18710 CDS
T03027
Name
(GenBank) Penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi00550
Peptidoglycan biosynthesis
mvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
X808_18710
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mvi01003
]
X808_18710
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mvi01011
]
X808_18710
Enzymes [BR:
mvi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
X808_18710
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
X808_18710
Glycosyltransferases [BR:
mvi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
X808_18710
Peptidoglycan biosynthesis and degradation proteins [BR:
mvi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
X808_18710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
AHG76391
UniProt:
W0QCY3
LinkDB
All DBs
Position
1971159..1973558
Genome browser
AA seq
799 aa
AA seq
DB search
MSDVELNEQSQEPEQKPKKGSYILTTLFKLGLIGACSVAFYGIYLDGKIRSKMDGQVWEL
PAEVYARIESIKIEDNLTLEQTKQALLDNGYRQVSQVATPGDFKIEENRLVLLRRAFPFP
ETPEAQRVLRLTFKDDKLTYIEDLVQAKLIEEFRLDPKLLAMLHSDSDEERQALKLQEYP
RLLIESLILTEDRRFYQHDGISPIGIARALITNYQAGRTVQGGSTLTQQLVKNLFLTNER
SLVRKINEALMSVILDFRYDKNRILETYLNEIYLGQNGSYQIHGFALASQFYFGRPIQEI
SLDQIALLVGMVKGPSLYNPWKNPKGATERRNVVLRLLLDHQVINQELYDLLSTRPLNVR
EKGTIYREQPAFMQALTLDLKNELGEVKSAQLSGTKIFTTLDRKQQRSAEQAIIIGLEDL
ENKDKKVTDLQSAIVVAEYRTGKVRAIVGDRLTQFAGFNRAIQSKRQIGSLVKPSIYAIA
LAQPDLFRLNTPIQNKQISIKVGSTYWTPRNYDRSFSGSVMLMDALVRSLNIPTVNIGMK
VGLKKVIAKQKEMGWDNAEIPPYPSTLLGSYSISPYDVTRSYQVIANEGLKTPLTTIEAI
ISHNGEMFYQRDNNKASEQVLPPEAAVQTMYAMQQVVERGTARSLQNDFAKLKLAGKTGT
TNNARDTWFVGVDGEHVTTVWLGKDNNGDTNLTGSSGALYVYKQYLERALPQAYKLPKLD
TIQWVGINSYGSWNCDSGRQIPVWRDKGQRYCTSTGTVVADKPSVWDALSLKKENNSNPK
AEEAEGKQSIPIEEVAPKE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgttgagttaaacgagcagagccaagagcctgagcagaagccaaaaaaggga
agctatattcttactactctatttaaacttggtttgattggggcttgtagcgttgccttt
tacggtatttatttggacggcaaaatccgtagcaaaatggacgggcaagtttgggaatta
cctgctgaggtttatgctcgcattgagagtatcaaaattgaagataacttaacgctggag
caaaccaagcaagcgttgttagataacggttatcgccaggtttcgcaagtagcaactcca
ggcgatttcaaaattgaagaaaatcgtttagtgttactccgccgtgcgttcccattccct
gaaacgcctgaagctcaacgtgtgctgcgtttaaccttcaaagatgacaaattaacttat
attgaagatttagtgcaggcgaaattaattgaagagttccgcctagacccgaaattgctg
gcgatgttgcattccgacagcgatgaagaacgccaagcattaaagctacaagaatatcct
cgtttattaattgaatccctaattttaactgaagatcgccgcttttatcagcacgatggg
atcagcccaattgggattgctcgtgcgttaatcactaactatcaagcaggacgtacggtg
cagggcggcagtactttaacgcagcagttggtgaaaaacctatttttaaccaatgaacgc
tctttagtgcggaaaatcaatgaagccttgatgtcggtgattttagattttcgttatgac
aaaaaccgcattttagaaacctacctcaacgaaatttatttaggacagaacggtagttat
caaatccacggctttgccttggcgagccaattctattttggcagaccgattcaagaaatt
agtctcgatcaaattgccttgttagtaggaatggtgaaaggtccgtcgctgtataatccg
tggaaaaatcctaaaggggcgacggaacgccgtaatgtggtattgcgtttattgcttgat
caccaagttataaaccaagaactttatgacttattaagtacccgcccattaaatgtgcgt
gaaaaaggcacaatttaccgtgaacaacctgcctttatgcaggcattaacgcttgatttg
aaaaatgaattgggtgaggtgaaatcagcccaactttccggtacgaaaatttttacaacc
ctagaccgtaaacagcagcgttcagcagaacaagcaattattattggcttagaagattta
gagaacaaagataaaaaggttaccgatctgcaatctgccattgtagtagcagaatatcgc
acaggtaaggtgcgggcgatagtgggcgaccgcttaactcaatttgccggttttaaccgt
gcgattcagtcgaaacgccaaatcggttctttggttaagccctccatttatgcgattgcg
ttggctcaacccgatttattccgtttgaatacgccgattcagaataaacagatttccatt
aaagtcggctcaacctattggacaccacgaaactacgaccgcagtttcagcggctcggta
atgttgatggacgctttggttcgttcgttgaatattccaaccgtgaacattgggatgaaa
gtcggcttgaaaaaagtgatcgctaagcaaaaagagatgggctgggataatgcagaaatt
ccaccatatccatcaacattgttaggttcttactcgatttcaccttatgatgtaacacgt
tcttaccaagtaattgcaaatgaagggttaaaaacaccattaacaaccattgaggcaatt
atttcgcataatggtgaaatgttctatcaacgagataacaacaaagcgagtgagcaggta
cttccaccggaagctgcagtgcaaacaatgtacgcaatgcaacaggtagtagaacgaggc
acagctcgtagtctgcaaaatgattttgcgaagttaaaattagcaggcaaaacaggtaca
accaataacgcaagagatacttggtttgtgggagttgatggagaacacgttaccaccgta
tggttaggtaaagataataacggcgatacaaatctgacaggttcaagtggtgcgttatat
gtgtataaacaatatcttgaacgagctttaccgcaggcgtacaaattaccaaaactcgat
actatacaatgggtagggattaatagctacggtagttggaattgcgacagcggcagacaa
attcctgtttggcgcgataaagggcaacgttattgcaccagcactggcacagtcgttgcg
gataaaccaagtgtgtgggacgctctttccctgaagaaagaaaataattcaaatccgaaa
gcagaagaggctgaaggcaaacaatctattccaatcgaagaagttgcaccaaaagaataa
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