Mannheimia varigena USDA-ARS-USMARC-1296: X808_19570
Help
Entry
X808_19570 CDS
T03027
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvi03009
]
X808_19570
Enzymes [BR:
mvi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
X808_19570
Ribosome biogenesis [BR:
mvi03009
]
Prokaryotic type
ribosomal protein modification factors
X808_19570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
YajR_YAM
Methyltransf_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AHG76475
UniProt:
W0QF18
LinkDB
All DBs
Position
2075581..2076918
Genome browser
AA seq
445 aa
AA seq
DB search
MSATPNIGFISLGCPKNLVDSERILTELRADGYNIIPSYEDADLVIVNTCGFIDSAVQES
LESIGEALEANGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEAVMNHVHKYVPKPEFN
PYTSLVPKQGVKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLASRPIVQVLDEAKRLVD
AGVKELLIVSQDTSAYSLDRKKEETTKTVFWNGMPIKSNLITLCEQLGSMGVWVRLHYVY
PYPHVDDLIPLMAAGKILPYLDIPLQHASPKILKAMKRPGSIERTLERIKKWREICPELT
LRSTFIVGFPGETEEDFQLLLDFLKEAQLDRVGCFKFSPVDGAVATDMPDQVPEEVKEER
FHRFMQLQQQISAERLQAKIGKTLPVIIDEIDEEGIIGRSMADAPEIDGVVYVDNLENKD
VSVGQIISVTITHADEYDLWGSLTN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaccccgaatattggttttatcagcttaggctgcccaaaaaatttagttgat
tccgaacgtattttaactgaactacgggcagatggttataatattatcccaagttatgaa
gacgctgacttagtgattgtaaacacctgcggttttattgattccgcagtgcaagaatca
ttagaaagcattggcgaggcgttggaagcaaacggtaaagtgatcgttacaggctgttta
ggagcaaaagaaaaccaaattcgtgaagttcacccgaaagtattggaaattacaggtccg
catagttatgaagcggtgatgaatcacgttcacaaatatgtgccgaaacctgagttcaat
ccttacactagccttgtaccaaaacaaggcgtaaaactcacaccaaagcattacgcttac
ttaaaaatttcagaaggctgtgatcatcgttgtacattctgtattattccatcaatgcgt
ggagatttggcaagccgcccgattgtgcaagtgctagacgaagcaaaacgcttggtagat
gcaggtgtaaaagagttattaattgtctctcaagacacctctgcttactcattagatcgc
aaaaaagaagaaactactaaaaccgttttctggaacggtatgccaattaaaagtaaccta
atcacactttgtgaacaattaggctcaatgggtgtttgggtgcgtttgcattatgtgtat
ccgtatccgcacgtggacgatttaattccactgatggcggcaggcaaaattctgccgtat
ttggacattccgctccagcacgccagcccgaaaattttaaaagcgatgaaacgccccggc
tccattgaaagaacccttgagcgtattaaaaaatggcgtgaaatctgccctgaattaacg
ctacgttccacttttattgtcggtttcccgggagaaacagaggaagatttccaactatta
ctcgatttcttaaaagaagcccaacttgaccgtgttggctgctttaaattcagcccggtt
gatggtgcggttgcaaccgatatgccagatcaagtgccggaagaggtgaaagaagaacgc
ttccaccgctttatgcagttacagcaacaaatttcagccgagcgtttacaggctaaaatc
ggtaaaaccttacctgtaatcattgatgaaattgacgaagaaggtattattgggcgttca
atggctgatgcacctgagattgatggtgtggtttatgtggataaccttgaaaataaagac
gtttctgtaggacaaattatttcagtaaccattacacatgcagatgagtacgatctgtgg
ggtagcttaacaaattaa
DBGET
integrated database retrieval system
