Mannheimia varigena USDA-ARS-USMARC-1296: X808_20590
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Entry
X808_20590 CDS
T03027
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi00300
Lysine biosynthesis
mvi00470
D-Amino acid metabolism
mvi01100
Metabolic pathways
mvi01110
Biosynthesis of secondary metabolites
mvi01120
Microbial metabolism in diverse environments
mvi01230
Biosynthesis of amino acids
Module
mvi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
X808_20590
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
X808_20590
Enzymes [BR:
mvi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
X808_20590
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHG76577
UniProt:
W0QE72
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All DBs
Position
2170402..2171652
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AA seq
416 aa
AA seq
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MNHFEYKNNQLFAEDVAIADIIAEHGTPAYIYSRATLERHWHAFDNAFGSHPHLVCFAVK
SNSNIALLNVMARLGSGFDIVSQGELERVLAAGGDPAKVVFSGVAKSHTEIQRALEVGIR
CFNIESISELHRINEVAGKLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVTQARE
VYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLREDGIELHHLDLGGGL
GVPYNGEEPPHPTEYAKALLEKLKGYKNLEIIIEPGRAITANAGILVTKVEYLKQSEDRN
FAIVDTGMNDMIRPALYEAYMQITEVDKTLSRKKAVYDVVGPICETSDFLGKQRELAVAE
GDLIAMRSAGAYGAAMSSTYNSRPQAAEIMVDGNQAHLIKARATFADLWRLEKLLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaccattttgaatataaaaacaaccaactttttgcggaagatgtggcgattgccgac
atcatcgctgaacacggcacgccggcttacatctactctcgagccaccctcgaacgccac
tggcatgcttttgacaacgcttttggctcacacccacatttagtctgctttgcggtgaaa
tcaaactcaaatatcgccttattgaacgtgatggctcgcctcggttcaggctttgatatt
gtgtcgcaaggcgaattggagcgtgtgcttgccgctgggggcgatcctgccaaagtggtt
ttctctggcgtggcgaaatcgcacaccgaaattcaacgtgcgttagaagtggggattcgt
tgctttaatatcgaatccatttccgagcttcaccgcatcaacgaagttgctggcaaatta
ggcaaaatcgccccaatttccctgcgtgtaaacccagatgtggacgcccacactcaccca
tacatctcaacaggactaaaagagaacaaattcggcgtgagcgtgacccaagctcgtgaa
gtgtaccgtttagcgaaaaccttaccaaacgtgaaaattaccggaatggactgccacatc
ggctcgcaattaaccgaattgcagcctttcttagatgcgaccgaccgtttgattgtgcta
atggaacagctgcgtgaagatggcattgagctacaccaccttgatttaggcggcggctta
ggtgtgccttacaacggcgaagaaccgcctcacccaaccgaatacgctaaagcgttgctg
gaaaaactcaaaggctacaaaaaccttgaaatcatcatcgaaccggggcgtgcaattacc
gcaaacgccggtattttggtgactaaagtggaatatttaaaacagagtgaagaccgcaat
tttgcgattgtcgataccggaatgaacgatatgattcgcccggcactttatgaagcctat
atgcaaattactgaagtggacaaaaccttaagccgtaaaaaagcggtttacgatgtggtc
ggtccgatctgcgaaacttccgatttcttaggcaaacagcgtgaactcgctgtcgccgag
ggagatttaatcgcaatgcgttcggcaggggcttacggtgcggcaatgtcttccacctac
aactctcgcccacaagcagcggaaattatggtggacggtaaccaagctcacttaatcaaa
gcccgagcaacctttgccgatttatggcgtttggaaaaattattaccttaa
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