Mannheimia varigena USDA-ARS-USMARC-1296: X808_20740
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Entry
X808_20740 CDS
T03027
Name
(GenBank) L-fucose operon activator
KO
K02430
DeoR family transcriptional regulator, L-fucose operon activator
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvi03000
]
X808_20740
Transcription factors [BR:
mvi03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
X808_20740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
Crp
HTH_11
HTH_Crp_2
FaeA
GntR
HTH_PafC
MarR
DUF2250
HTH_5
HTH_36
Fe_dep_repress
HcgF
Put_DNA-bind_N
HTH_20
TrmB
MarR_2
HxlR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AHG76592
UniProt:
W0QE86
LinkDB
All DBs
Position
2190354..2191100
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AA seq
248 aa
AA seq
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MQRRHNQIITYLEKFDEARVQELAEYCAVSIETIRRDLNKLDKNGLLHRTHGGAVSHKKR
DIGRSFSTRLRANSEAKRSIAENVLSHLSPESVIALDASSTSWNVAQRIPNIPCTIVSSS
MRIIRSLSHKPHIKTIATGGVYSEKYDAFYGPLSEQLLSRLKIDIAIISCTGIADGAIWE
SNEINISFKRKLLSNSKEIFLLADHSKFDRKDLIQMEILSCIDKLFVDQMPSEPLKNYCL
ENQIQIII
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaagacacaatcaaattattacctatttagaaaagtttgatgaagcgagagtg
caggaactcgcggagtattgtgccgtttcaattgaaaccattcgtcgagacttaaacaaa
ctagataaaaatgggctattacaccgtacacacggaggtgcagtaagtcataaaaagcga
gatatcggacgttcattcagcactcgtttaagggccaacagtgaagccaaacgcagtatt
gcagaaaatgtactttctcatttatcaccagaatcggttattgctcttgatgccagctct
acctcttggaatgtcgcacaacgaattccaaatattccttgtactatcgtgagtagttca
atgcggattattcgtagtctttcccataaaccacacataaaaaccattgcgactggtgga
gtttattcagagaaatatgatgccttttatggccctctttcggaacagctcttatcccgt
ttgaaaattgatattgctattatctcttgtacgggtattgcagacggtgcaatttgggaa
tctaatgaaataaatatctcatttaagcgtaaattattatcaaatagtaaagagattttt
ttgttggcagaccatagcaaatttgaccgtaaagatttaatccaaatggaaattctttct
tgcattgataaattatttgttgatcaaatgccatctgagccattaaaaaattactgttta
gagaaccaaatccaaattattatttag
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