Mannheimia varigena USDA-ARS-USMARC-1296: X808_20860
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Entry
X808_20860 CDS
T03027
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvi03009
]
X808_20860
Enzymes [BR:
mvi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
X808_20860
Ribosome biogenesis [BR:
mvi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
X808_20860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
FtsJ
Methyltransf_5
Methyltransf_12
Methyltransf_37
Methyltransf_11
TrkA_N
AtzG-like
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AHG76604
UniProt:
W0QCH1
LinkDB
All DBs
Position
complement(2202495..2203829)
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AA seq
444 aa
AA seq
DB search
MAFLFMKKQSTKALSSRAVSATIILQVLDQGKSLSTLIPEAQKQLEPKDLPLVQEITFGV
CRVLPRLESIIKLLIEKPLKGKTRLVHCLLLVGLYQLLYMRVPPHAAVDEVVNATKALKL
DSFRALTNGVLRRFLREQDEILAKVDKHWQTLHPEWLVNKLKKAYPHWREIVEANNQRPP
MWIRVNQQHIKAKDYAVLLGDLVAKNLQNMTACSPHCALLLDKPVGVNQLHNFEQGWATV
QDVHAQWSAELLGAENGELILDACAAPGGKTTHILEKAPNAKVIALDIEESRLNRVRENL
ARLQQTATVICGDASKPEEWLEEGMMFERILLDAPCSATGVIRRHPDIKWLRQENDIAEL
AELQGKILNSLWNRLKPNGILLYSTCSVLPEENSEQIQRFVQTMPNAKLVEMDFNSEKVL
EKQFFPQHNGGDGFFYAKLQKVAS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttatttatgaaaaaacaatctacaaaagcactttcttctcgagcagtaagt
gcaactattattttacaagtgctagatcaagggaaatcgctctcaacccttattccagaa
gcccaaaagcagcttgagccaaaagatttacccttggtacaagaaattacctttggtgtg
tgccgagtattgcctcgtttagagtcgatcatcaaattattgatagagaaaccgcttaaa
ggtaaaactcgtttagtgcattgcttattgttggtggggttatatcaattactttatatg
cgagtgccacctcacgctgcggtagatgaagtggtgaatgccactaaagcgttaaagcta
gacagcttccgggccttaaccaacggtgttcttcgtcgtttcttgcgtgagcaggacgaa
attttggcaaaggtagataaacattggcaaacattacaccctgaatggctagtgaataag
ctgaaaaaagcttatccgcattggcgtgagattgtggaggcgaataaccaacgtccaccg
atgtggattcgggtcaatcagcaacatatcaaagcaaaagactatgcagtattacttggt
gatttagttgcaaaaaatctgcaaaatatgaccgcttgtagtcctcattgtgccttgctg
ttagataaaccagtcggtgtaaatcaattacataatttcgagcaaggttgggcaacagtg
caagatgttcacgctcagtggtcggcggaattgttgggggcggaaaatggcgaactgatt
ttagacgcttgtgctgcaccgggcggaaaaaccacccatattttagaaaaggccccgaat
gcaaaagtgattgctttagatatcgaagaaagccgcttaaaccgagtgcgagaaaattta
gcaagacttcagcaaactgcaaccgtgatttgtggtgatgcgtctaaaccagaggaatgg
ctcgaagaaggaatgatgttcgagcgtattttattagatgccccttgctcagcaacaggg
gttattcgtcgtcaccctgatattaaatggttacgccaagaaaatgatattgctgaattg
gcagaacttcagggcaagattctcaattcgttgtggaataggctcaaacctaatggtatt
ttgctgtattcaacttgttccgtgctacctgaggaaaatagcgaacaaattcaacgcttt
gtgcaaacaatgccaaatgcaaaattagtggaaatggattttaatagcgaaaaggtattg
gaaaaacagtttttccctcaacacaatggtggcgatggcttcttctatgcaaaattacaa
aaagtggcaagttag
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