Mannheimia varigena USDA-ARS-USMARC-1296: X808_21070
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Entry
X808_21070 CDS
T03027
Name
(GenBank) HTH-type transcriptional activator rhaS
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvi03000
]
X808_21070
Transcription factors [BR:
mvi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
X808_21070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
HTH_11
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
AHG76625
UniProt:
W0QFH9
LinkDB
All DBs
Position
2225438..2226241
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AA seq
267 aa
AA seq
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MVLKLSASEFFHSSTQPLAIEPRAPQDSFPEHTHNFNELIIINKGHGRHILNDYPCELHQ
GMVLYIESKDRHLYENVEGLHLTNILVQSYNNFKFIHNIESMLKAFKPAQGHCKLVDNKT
LSASIKLIENCSLSSDGMPLEADFLQLLRLLQLNAFDEIGSGGTDSQINQLLIWLKHHFA
EEIDWELLAERFDLSLRTLHRYFKLQTGCTPQVFLTKLRLAHAYYQLRYTDKSIINIAYE
SGFNDSCYFSTCFKNEFKCCPRHLRDM
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggtattaaaattatctgcaagtgagttttttcattcaagcactcagcccttagctatt
gaaccaagagctccacaagatagcttccctgagcatacgcataattttaatgaattaatc
attattaataaggggcacgggcgacatattttaaatgactatccttgcgaactgcatcaa
ggaatggtgctatatattgaatctaaagatcggcatttatatgaaaatgtagaaggactg
catttaaccaatattttggtgcaatcctataataacttcaaatttattcacaatattgaa
tcaatgctaaaagccttcaaaccagcccaagggcattgtaaattagtggataataaaacc
ttatcggcatcaataaaactcatcgagaattgctcactatcttcagatggtatgccatta
gaggctgatttcctccaactgcttcgattattacaattaaatgcttttgatgaaatagga
agtgggggcacagatagccaaattaaccaattattaatttggctaaaacatcattttgcg
gaagaaattgattgggaattgcttgctgaacgatttgatttatcattaagaacattacac
cgttatttcaaattacaaaccggttgtactccccaagtatttttgaccaaattgaggcta
gctcacgcttattatcaattacgttacactgataaatctattataaatattgcgtacgaa
agcggttttaacgatagttgctatttttctacctgttttaaaaatgaatttaaatgttgt
cctagacatttaagagatatgtaa
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