Mannheimia varigena USDA-ARS-USMARC-1296: X808_21110
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Entry
X808_21110 CDS
T03027
Name
(GenBank) L-arabinose-binding periplasmic protein
KO
K10537
L-arabinose transport system substrate-binding protein
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
X808_21110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvi02000
]
X808_21110
Transporters [BR:
mvi02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
X808_21110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AHG76629
UniProt:
W0QCJ9
LinkDB
All DBs
Position
complement(2229646..2230659)
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AA seq
337 aa
AA seq
DB search
MKTSKRRFLKSILAVSVLAVTGLYSNVTYAKDADTIKLGFLVKQPEEPWFQTEWRFADKA
AQDLGGVEIIKIAVPDGEKTLNAIDNLAANGAKGFVICTPDPKLGPAIMAKARSYGLKVV
TVDDQFLNAAGEPMTNVPLIMMAATEIGERQGQELYKEMQKRNWDVKDTAVLAITADELD
TARRRTEGSIDALIKSGFPVEKIYKSPTKSNDIPGALDAANSMLVQHPEVKNWLIVGMND
NTVLGGVRATEGQGFKAENVIGIGINGTDAVNELSKPNPTGFVGSLLPSPDVHGYRSTEM
LYKWVKEGIEPPKFTPVGDPVLLNRENFRAELDKKGL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgagcaaaagacgttttttaaaatcaattttagctgtctctgttcttgctgta
actggattatattcaaatgttacttatgcaaaagatgctgacacgatcaaactaggcttc
ttagttaaacagcctgaagagccttggttccaaacagaatggcgttttgcggataaggct
gctcaagatttaggtggagtagaaattatcaaaattgcggttccagatggtgaaaaaacg
ttaaatgctatagataatttagctgctaatggagcaaaaggatttgttatttgtacgccc
gatccaaaacttggtcctgcgattatggcgaaagcaagatcttatggtttaaaagtggtt
acagttgatgatcagttcttaaatgcagctggtgagccgatgacaaatgtgccgttaatt
atgatggcagccaccgaaattggtgaacgtcaaggtcaggaactttacaaagagatgcaa
aaacgtaactgggatgtgaaagatactgcggtgcttgcaattactgcggatgagttagat
accgctcgccgtcgtactgagggttctattgatgcgttaattaaatcaggtttccctgtt
gagaaaatctataaatcaccaacaaaaagtaatgatattccgggagctttagatgctgca
aactcaatgcttgttcaacatcctgaagtgaaaaactggttaattgtcggtatgaacgat
aacactgtattaggtggtgttcgtgcaaccgaaggtcaaggttttaaagctgaaaatgtg
attggcattggtattaatgggactgatgcggtaaatgagctttctaaaccaaatccaaca
ggttttgtgggttcattattaccaagcccagatgttcacggctatcgtagtacagagatg
ctatataaatgggttaaagaaggcattgaaccaccaaaattcacaccagtcggtgatcca
gttctgttaaaccgtgaaaatttcagagccgagctagataaaaaaggtctctaa
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