Mannheimia varigena USDA-ARS-USMARC-1296: X808_4100
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Entry
X808_4100 CDS
T03027
Name
(GenBank) Pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvi03009
]
X808_4100
Enzymes [BR:
mvi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
X808_4100
Ribosome biogenesis [BR:
mvi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
X808_4100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
DUF8729
DUF4284
Motif
Other DBs
NCBI-ProteinID:
AHG74933
UniProt:
W0QCI4
LinkDB
All DBs
Position
447098..447781
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AA seq
227 aa
AA seq
DB search
MKQPTFKRTTHKRSSFAKNLQKNEKKRPLAFFETIVLLFNKPYDVLTQFTDEQGRKTLKD
FIPIPNVYPVGRLDRDSEGLLLLTNNGELQHRLAHPKFEKQKTYWVQVEGIPSAEDLAKL
EKGVELKDGLTQPAKARTIEPPDFDWQAVPKIRERKSIPTSWVELIIHEGKNRQVRRMTA
HIGFPTLRLIRVGLGNFELADLDSGKYQVLSESEKRKLFKQLGLKDE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaccaacctttaaaagaactacacacaagcggtcaagttttgcgaaaaatttg
caaaaaaatgagaaaaaacgaccgcttgctttttttgaaacaatcgtactgctgttcaat
aaaccctacgatgtgctgacccaatttaccgatgagcaagggcgaaaaaccttaaaggat
tttatcccgattcccaatgtttaccctgttggtcggttagatagagatagcgaaggctta
ttgcttttaactaataatggcgaacttcagcaccgtttagctcacccgaaatttgagaaa
cagaaaacttattgggtgcaagtggaaggtattccttccgctgaagatttagccaagcta
gaaaaaggagtagagctaaaagacggtttaacccagccggcaaaagcgagaacgattgag
ccaccagactttgattggcaagcagttccgaaaattcgtgagcgaaaaagcattccaacc
agctgggttgaattgattattcacgagggcaaaaatcgccaagtcagacgaatgacggca
catatcggttttccaacgttacgcctaattcgagttggactaggcaattttgaattagcc
gatttagatagtggcaaataccaagtattatcagaaagcgaaaagcgtaagttatttaag
cagctaggattaaaagatgagtaa
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