Mannheimia varigena USDA-ARS-USMARC-1296: X808_5370
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Entry
X808_5370 CDS
T03027
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi01501
beta-Lactam resistance
mvi02010
ABC transporters
mvi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
X808_5370
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X808_5370
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
X808_5370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvi02000
]
X808_5370
Transporters [BR:
mvi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
X808_5370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_29
AAA_16
AAA_22
AAA_18
Sigma54_activat
nSTAND3
nSTAND1
PRK
NACHT
ATP-synt_ab
Mg_chelatase
AAA_23
RsgA_GTPase
ResIII
AAA_7
ATPase
FtsK_SpoIIIE
NB-ARC
ABC_ATPase
DUF87
PPV_E1_C
AAA_15
TsaE
DUF5906
EspG
Myosin_head
TIP49
NNH5
Ribosomal_S7
HetR_C
Motif
Other DBs
NCBI-ProteinID:
AHG75060
UniProt:
W0QB41
LinkDB
All DBs
Position
complement(579190..580785)
Genome browser
AA seq
531 aa
AA seq
DB search
MKLLEVKNLDVYLKTDEELVHAVRNVSFSIEKGQTLAIVGESGSGKSVTSMAIMQLLPKN
IVKFGENSSIIFEEQELLSLSEKSMQAIRGDRIGMIFQEPMTSLNPYLPIGKQVAEAIQT
HNPQITNAQAEKLVLETLQKVKIPDAEKKMVCYPHEFSGGQLQRIMIAMAIINKPDLLIA
DEPTTALDVTTQAEILDLMHDLQRDMGMAIILISHDLRLVHKYSDFVCVMQSGEIIERGE
TEQVFTNPQHPYTQELLTPIPDNLKGELPANAPTLIRAENIEVDYILKRSLFGKPKKVFN
ALKSLSLELKTGETLGIVGESGSGKSTLGRAIMQILDYRGNLTFADKTLAKLNKAEHQAL
KKDMQMVFQDPFNSLSPRLTVGEIIAEGLTVHYPQMSKAERREKVMKILEEVNLNPAMIN
RYPHEFSGGQRQRIAIARAIILEPKFVLLDEPTSALDRSTQITVIELLNRLQKKYGLSYI
FISHDLAVIRALSDRVIVMSQGDIVESGDVKQIFNAPQQEYTKRLILASNL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattagaagttaaaaatctcgatgtttatttaaaaacggacgaagagttggta
cacgcagtgcgtaacgtctctttctcgattgagaaagggcaaactttggctattgtgggc
gaatccggctcgggtaaatccgtcacctcaatggcgattatgcaacttttgccgaaaaac
attgtgaaattcggcgaaaattccagcattatttttgaagagcaggagctactctcgctg
tccgaaaagtcaatgcaagcgattcgaggtgatcgtattggtatgattttccaagagccg
atgacctcgctcaatccttacctgcctattggcaaacaagtggctgaagcaattcaaact
cataatccacaaattaccaatgctcaagccgaaaaattggtattggaaaccttacagaaa
gtaaaaattcctgacgctgaaaagaaaatggtgtgctatccgcacgaattttcgggcggt
cagctacagcggattatgatcgcaatggcaattatcaacaaacctgatttgctgattgcc
gatgagccaaccaccgctttagacgtgacaactcaagccgaaattttggatttaatgcac
gatttacagcgtgatatgggaatggcgattatcctgatttcccacgacttgcgtttggtg
cataaatacagcgatttcgtctgcgtaatgcaaagcggcgaaatcattgagcgtggcgaa
accgagcaagtgttcacgaatccacagcacccttacactcaagagctgttaaccccaatt
cccgataatctcaaaggcgaattgccggcaaatgctccaacgcttattcgggcggaaaat
atcgaagtggattacatcttaaaacgctcgctattcggcaagccgaaaaaggtattcaat
gcgttgaaatcgctttcgcttgagctcaaaaccggcgaaacgcttggtattgtgggggaa
tcgggctcgggcaaatccacgcttgggcgtgcgattatgcagattttggattaccgaggc
aacctcacttttgccgacaaaaccctcgctaaattgaacaaagcagaacatcaagctctg
aaaaaagatatgcaaatggtgttccaagatccgttcaactccctttcgccacgcttaacc
gtgggcgaaatcatcgccgaaggcttaaccgtgcactatccgcaaatgagcaaagcggaa
cgccgtgaaaaagtgatgaaaattttggaagaggtgaatttaaaccctgcgatgatcaac
cgctatccgcacgaattttccggcggacaacgccaacgtattgcgattgccagagcgatt
attttagaaccaaaatttgtgttgctggacgagccaacctccgcccttgaccgttctacc
caaatcaccgtgatcgaactgctcaaccgcttacagaaaaaatatggcttaagctatatt
ttcatcagccacgatctcgccgtgatccgagccttaagtgaccgagtgatcgtaatgagc
caaggcgacattgtagaaagcggcgatgtgaaacagatcttcaacgccccacaacaagag
tacaccaagcggttaattttggcgtctaatttgtaa
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