Mannheimia varigena USDA-ARS-USMARC-1296: X808_5830
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Entry
X808_5830 CDS
T03027
Name
(GenBank) DNA-binding protein for site-specific recombination and inversion
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvi03000
]
X808_5830
03036 Chromosome and associated proteins [BR:
mvi03036
]
X808_5830
03400 DNA repair and recombination proteins [BR:
mvi03400
]
X808_5830
Transcription factors [BR:
mvi03000
]
Prokaryotic type
Helix-turn-helix
Other families
X808_5830
Chromosome and associated proteins [BR:
mvi03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
X808_5830
DNA repair and recombination proteins [BR:
mvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
X808_5830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
Phage_NinH
HetZ
HTH_28
HPF1
Motif
Other DBs
NCBI-ProteinID:
AHG75106
UniProt:
W0Q983
LinkDB
All DBs
Position
complement(628651..628947)
Genome browser
AA seq
98 aa
AA seq
DB search
MLEQQPTQNPLTVTMLNAQAQQVNKPLRDNVKAALKNYLSQLNGEDPTELYELVLSEIEH
PMLDMVMQYTRGNQTRAATMLGINRGTLRKKLKKYGMG
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacaacaacctacacaaaacccattaacagtaacaatgttaaatgcacaggca
cagcaggttaataaacctctgcgcgataacgttaaagcagcattaaaaaactatttatct
caattaaatggtgaagatccaacagaattatacgaattagtattatctgaaatcgaacac
ccgatgttagatatggtgatgcaatatactcgcggtaaccaaactcgtgctgcaacaatg
ttaggcattaaccgtggcacattacgtaaaaaattaaaaaaatacggtatgggctaa
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