Mannheimia varigena USDA-ARS-USMARC-1296: X808_5970
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Entry
X808_5970 CDS
T03027
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi00061
Fatty acid biosynthesis
mvi00071
Fatty acid degradation
mvi01100
Metabolic pathways
mvi01212
Fatty acid metabolism
mvi02024
Quorum sensing
mvi04146
Peroxisome
Module
mvi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
X808_5970
00071 Fatty acid degradation
X808_5970
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
X808_5970
09145 Cellular community - prokaryotes
02024 Quorum sensing
X808_5970
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mvi01004
]
X808_5970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvi04147
]
X808_5970
Enzymes [BR:
mvi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
X808_5970
Lipid biosynthesis proteins [BR:
mvi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
X808_5970
Exosome [BR:
mvi04147
]
Exosomal proteins
Exosomal proteins of breast milk
X808_5970
Exosomal proteins of breast cancer cells
X808_5970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
CHASE3
Motif
Other DBs
NCBI-ProteinID:
AHG75120
UniProt:
W0QBA8
LinkDB
All DBs
Position
complement(640504..642282)
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AA seq
592 aa
AA seq
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MMTSLDFHFINRFHQQAQRLPLQPAARFLQNGKWVELNWVTLQKHIDELSYALLASGIGV
QDKVAIFAQNMPRWTIADISTMQIRAVSVPIYATNTAKQVEYILNDADIKILFVGDQEQY
DIAIEIANKCPLLQKIVAMKQSIKLRDIKIAQHWQDFINVSPNDTELNQRLNDKRLDDLF
TLIYTSGTTGEPKGVMLDYANLAYQLQAHDKALPNIDENDVSLSFLPLSHIFERAWVYYV
LHRGAINCYLEDPHQVRDALTALKPTLMCAVPRFYEKIYAAIWDKVNQAPSHRQTLFNWA
IRSAQSHLLGKKTTFLNRLQYIIADKLVLSKLRSLLGGKIRMMPCGGATLDPSIGTFFQS
IGINIKLGYGMTETTATVSCWSENNINVHSIGVLMPGTEVKIGEENEILVRSGAVMRGYY
KKPEETAKTFTADGFLKTGDAGELDAQGNLYITDRIKELMKTSNGEYIAPQYVEGKIGKD
KFIEQIAIIADAKKYVSALIVPCFDSLEEYAKKLNIHYQDRLELIKNAEVVKMFEQRINE
LQKDLASFEQIQKFTLLSQAFTTKMEEITPTLKLRRKVILERYKEQIEQMYK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgatgacatctttagacttccactttatcaatcgttttcaccaacaagctcagagatta
cctctccagcccgcagctcgttttctccaaaatgggaaatgggtggagttgaattgggta
acattgcaaaaacatattgatgaactttcttacgctttgctagctagtggtattggggtg
caagacaaagtggctatttttgcacaaaatatgcctcgttggacgattgccgatatcagc
acaatgcaaattcgtgccgttagcgtgccaatttatgcaacgaatactgctaaacaagtt
gagtatattttaaacgatgcagatattaaaattctctttgttggcgatcaagaacaatat
gatattgctattgaaatagcgaacaagtgtccactattacaaaaaatagtggcaatgaaa
cagtctattaaattgcgtgatatcaaaattgctcaacattggcaagattttatcaacgta
tcgccaaatgatactgaattgaatcaacgattaaatgataaacgtttagatgacctattc
actcttatttatacatcaggcacaacaggtgaacccaaaggggtaatgctagattatgcg
aatttagcttatcagcttcaggctcacgataaagcacttccgaacatcgatgaaaatgat
gtatcgctctcatttctacccctttctcatatttttgaacgggcttgggtctattatgtt
ctacaccgaggtgctataaactgttatttggaagatccccatcaagttcgtgatgctctt
actgcactaaaaccgactttaatgtgtgctgtaccaagattctatgaaaaaatttatgcg
gcaatatgggataaagtaaatcaagctccaagccaccgccaaaccttgtttaattgggct
attcgctcggctcaatcccatttacttggtaaaaaaacaacttttttaaaccgcttgcaa
tacatcattgctgataaattggttttatccaaattacgttctcttctcggtggaaaaatc
cgtatgatgccctgcggtggtgcaacacttgatccttctataggtacctttttccaaagt
attggtattaacattaaacttgggtatggtatgactgaaactactgccacagtttcctgc
tggtcagagaacaatatcaatgttcattcaattggtgtcttaatgcctggtacagaagtt
aaaatcggtgaagaaaatgagattttagtacgaagcggagccgttatgagaggatattac
aaaaagcctgaagaaaccgctaagactttcacagcagatggatttttgaaaacaggggat
gcaggagaacttgatgctcaaggtaatctttatattacagatagaattaaggagttaatg
aaaacctcaaatggcgaatatattgcaccacaatatgttgaagggaaaattggtaaagat
aaatttatagaacaaattgccattattgctgatgcgaaaaaatatgtttctgcattgatt
gtcccttgctttgacagccttgaggaatacgccaagaaactgaatatccactatcaagat
cgcctagagctgataaaaaatgctgaagtggttaaaatgttcgaacaacgcataaatgaa
ttgcaaaaagatcttgcgagttttgaacagatacaaaaatttaccttattatctcaagca
tttacaactaaaatggaagaaattacgcctaccttaaaactaagacgaaaagtgattttg
gaacgctacaaagaacaaattgagcaaatgtataaatag
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