Mannheimia varigena USDA-ARS-USMARC-1296: X808_6050
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Entry
X808_6050 CDS
T03027
Name
(GenBank) Holliday junction DNA helicase motor protein
KO
K03550
holliday junction DNA helicase RuvA
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X808_6050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvi03400
]
X808_6050
DNA repair and recombination proteins [BR:
mvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X808_6050
RecFOR pathway proteins
X808_6050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
Transposase_20
HHH_8
Cdd1
5_3_exonuc
DUF3842
Motif
Other DBs
NCBI-ProteinID:
AHG75128
UniProt:
W0QD09
LinkDB
All DBs
Position
complement(648958..649563)
Genome browser
AA seq
201 aa
AA seq
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MIGRLHGKIIEKQPPEILLDVQGVGYELLLPMTSFYSLPQVGDETTIFTHLVVREDAHLL
FGFAQKQDRALFRELIKTNGVGPKLALAILSAMSVSQFATAIENEELAKLTKIPGIGRKT
AERLLVELKGKFKGIAQTDFFVEVSHDDIVASNTPDPANEALDALIALGYKSTDAEKMIK
KVNKAGATSEQLIREALKNSL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgataggacgattacacggcaaaattattgaaaagcaaccaccagaaattttactggac
gtacaaggtgtgggctatgaattacttctcccaatgacgagcttctacagcttgccacaa
gtaggcgatgaaaccactattttcactcatttagtagtgcgagaagatgctcacttactc
tttggctttgcccaaaaacaagatagagccttatttcgtgagctaattaaaaccaatggt
gttggcccaaaactggctcttgcgattctttctgcaatgtcggtttcacaatttgctact
gcaattgaaaatgaagaattagccaaactcactaaaattccgggtattggcagaaaaaca
gcagaacgtttgcttgttgagttaaaaggtaaatttaaaggcattgctcaaactgatttc
tttgttgaagtttcacacgatgacattgttgcaagcaatacgccagatccggcaaatgaa
gctcttgatgccttaattgccttaggttataaatcaactgatgcagaaaaaatgatcaag
aaagtcaataaagcaggggcaaccagtgaacagctcattcgtgaggcattaaaaaattcg
ttataa
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