Mannheimia varigena USDA-ARS-USMARC-1296: X808_6860
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Entry
X808_6860 CDS
T03027
Name
(GenBank) AraC family transcriptional regulator
KO
K18991
AraC family transcriptional regulator, activator of mtrCDE
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvi03000
]
X808_6860
Transcription factors [BR:
mvi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
X808_6860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
Cupin_6
HTH_AraC
Cupin_2
AraC_binding
Cupin_3
MPI_cupin_dom
HTH_3
JmjC_2
Motif
Other DBs
NCBI-ProteinID:
AHG75209
UniProt:
W0Q8L8
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All DBs
Position
complement(728798..729697)
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AA seq
299 aa
AA seq
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MDVLDKLLAFSQISAGLNVKCQLQGKWQLDNPYQDRQAVAHIVSQGSAYLYHNGETIQLN
QGDIVFFPKSADHALRSQIEPVSVKTVINQAELGGFTLVQSGNTQSECDLFCLHFHYDSQ
ADLMDNLPEMLIFKATETPLNAILSLLRQEGDDPGFASKSVVNSLALVILTMIFRQYLTH
HERETVGVLKAWQDTRLRPLMREILLNPELSWQIEEMAAVIHISRSQLIRLFNKNLGVSP
HAFVHKMRLQKAAMLLKSQPDSVLSIALACGFQSEPHFITAFKKAYGETPSQYRQSKMG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacgttttagataaactcttggctttttcccaaatttcagcagggctcaacgttaaa
tgccaactacaaggtaaatggcagttagataacccgtatcaagatagacaagcagtagca
catattgtcagccaaggctcagcttatctttaccataacggagaaaccatccagctgaat
caaggtgatattgtcttttttccgaaatccgctgatcacgccttacgcagccaaattgag
ccagttagtgtaaaaaccgtgattaaccaagccgaacttggtggtttcaccttggtgcaa
agcggtaatactcaatcagagtgcgatctgttttgtctccattttcactatgatagccaa
gcggatttaatggataacttacctgaaatgctaatttttaaagcgaccgaaacgccatta
aacgcgattctaagcctactccgacaagaaggcgatgatcctggttttgccagcaaatca
gtggtaaattcattggcactcgtgattttaaccatgatttttcgccaatatttaacccat
cacgagcgggaaacagtcggcgtattaaaagcgtggcaagatacccgcttacgtccgtta
atgcgtgaaatcttacttaatcccgagctttcgtggcaaattgaggaaatggcagcggta
attcacatatcccgttcgcagcttattcgtttgtttaacaaaaatttgggcgttagcccc
cacgcttttgtgcataaaatgcggttacaaaaagccgcaatgttgctaaaaagccagccc
gattcggtattaagtattgctctagcctgtggttttcagtctgaaccgcattttattacc
gcctttaaaaaagcttatggcgaaacgccaagccaatatcggcaaagtaaaatggggtaa
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