Mannheimia varigena USDA-ARS-USMARC-1296: X808_7470
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Entry
X808_7470 CDS
T03027
Name
(GenBank) Ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvi03009
]
X808_7470
Enzymes [BR:
mvi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
X808_7470
Ribosome biogenesis [BR:
mvi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
X808_7470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AHG75270
UniProt:
W0QBR6
LinkDB
All DBs
Position
789052..789744
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AA seq
230 aa
AA seq
DB search
MRLDKFIAKNTGLTRSQAAKALKSGIVTVNGKIEKSGAAKISQEDEIYYEDQKLEWMEAG
QYFMLYKPQGYICSHDDGEYPTVFQFFDYPLMTKLHTAGRLDVDTTGLVFLTDDGKWSHR
ITSPKHHCEKTYLVTLADPVEDFYAEKLAEGILLRGEKEPTLPAKLEIFDDYNVNLTISE
GRYHQVKRMFAALGNKVEALHRWRIGDVILDETLAEGEFRPLTQTEIESF
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataaatttatcgccaaaaataccggcttaactcgttcgcaggctgcaaaa
gcactgaaaagcggtattgtgacagtcaatggaaaaatcgaaaaaagcggtgcagcaaaa
atcagccaagaagatgaaatttattacgaagatcagaaactagagtggatggaggcaggg
caatattttatgctctacaagccacagggctatatttgctcgcacgatgacggtgaatat
ccaaccgtgttccaatttttcgattatccgctaatgaccaaactgcacacagcaggcagg
cttgatgtagataccacagggcttgtgtttttaaccgatgacggcaaatggtcgcatcgc
atcacttcgccaaagcaccattgcgaaaaaacttacttggtcacattagccgatcctgtt
gaggatttttatgcggaaaagttagccgaaggcattttactgcgtggcgaaaaagagccc
actttgccggcgaaacttgaaattttcgacgattacaacgtcaatttaaccattagcgaa
ggacgttatcatcaggtaaaacgaatgtttgcagctcttggcaacaaagtagaagcgtta
caccgttggcgaattggcgatgtgattttagacgaaaccttggcagagggcgaatttcga
ccgcttacccaaaccgaaattgagagtttttaa
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