Mannheimia varigena USDA-ARS-USMARC-1296: X808_8010
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Entry
X808_8010 CDS
T03027
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvi03400
]
X808_8010
DNA repair and recombination proteins [BR:
mvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
X808_8010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
RecA
SLFN-g3_helicase
GvpD_P-loop
AAA
ABC_tran
AAA_14
AAA_16
NTPase_1
AAA_24
Rad51
zinc_ribbon_6
nSTAND3
AAA_29
Viral_helicase1
DUF7125
PAXNEB
Zeta_toxin
AAA_30
DZR
zf-RING_10
cobW
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHG75324
UniProt:
W0Q8X5
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Position
complement(850784..852163)
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AA seq
459 aa
AA seq
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MAKAPKTAYVCNDCGAEYSRWMGQCKECKAWNTISEIRLISSKESAKSDRFSGYAGETSG
KVQTLSDISLQEVPRFSSGFNELDRVLGGGVVPGSAILIGGHPGAGKSTLLLQVMCGLAQ
HLPTLYVTGEESLQQVAMRANRLGLPTDNLKMLSETSVEHICNIADQEKPKIMVIDSIQV
MHLSDIQSSPGSVSQVRECASFLTRYAKTRQVAIIMVGHVTKDGTLAGPKVLEHAIDASL
LLEGESDSRFRTLRSQKNRFGAVNELGVFAMTELGLKEVKNPSAIFLSRSEEQTPGSSVM
VLWEGTRPLLVEIQALVDHSMLATPRRVAVGLDHNRLSLLLAVLHRHGGLQMSDQDVFVN
VVGGVKVTETSADLALILALISSFRNRSLPQDLVVFGEVGLAGEIRPVTSGQERISEAAK
HGFRRAIIPHGNAPKKAIKDMEVFTVKKLSDALDILGNL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaccaaaaaccgcctacgtttgtaatgattgcggtgcagaatattcccgt
tggatggggcaatgcaaagaatgtaaggcttggaatacgattagcgaaattcgcctgatt
tctagtaaagaatcggcaaaatctgaccgttttagcggctacgcaggtgaaacctccggc
aaagtgcaaacgctgtcggacatcagtttgcaggaagtgccacgttttagcagcggcttt
aatgagctggatcgtgtgctaggtggtggtgttgtgccgggttcagctattctgattggc
ggacaccccggtgctgggaaaagtacattattgctacaagtaatgtgcggattggctcaa
cacctgcctaccctttatgtgacgggggaagaatcgcttcaacaagtggcgatgcgggca
aaccgtttaggcttgccaaccgataatttgaaaatgctttctgaaacttctgtggagcat
atttgcaatattgcagaccaagaaaagccgaaaattatggtgattgactccattcaggta
atgcatttaagcgatattcaatcctcccccggaagcgtatcacaagtgcgtgaatgtgcc
tcattccttacacgttatgccaaaactcgccaagtggcgattattatggttgggcacgtc
accaaagacggtacactggcaggcccgaaagtgttggaacacgccattgatgcctcgctt
ctgcttgagggcgaatcggactcacgcttccgcactctccgcagccagaaaaaccgtttc
ggggcggtgaacgaacttggcgtatttgcaatgactgaactcggcttgaaagaggtaaaa
aacccctcggcaattttcctaagccgcagcgaagagcaaacgccgggcagctcggtaatg
gtactttgggaagggacacgtccgttattggtggaaattcaagcgttggtggatcactca
atgctagcgacccctcgccgtgtggcggtggggttagatcataaccgcttatcgctactg
cttgcggttttacaccgccacggagggttgcaaatgtcggatcaagatgtgttcgtgaat
gtagtcggtggcgtgaaagtaacggaaaccagtgccgatctcgccctgattttagccttg
atttcgagctttcgtaatcgctcattgcctcaagatttggtggtgtttggcgaggttgga
ttagcaggtgaaatccgccctgtcaccagcggacaagaacgtatcagcgaagccgctaaa
cacggctttaggcgagcgattattccacacggaaacgctcccaaaaaagcgattaaagat
atggaggtatttaccgtgaaaaaactcagcgatgcgttggatattcttggcaatctataa
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