KEGG   Candidatus Methanosuratincola verstraetei: ACO0C9_01300
Entry
ACO0C9_01300      CDS       T10956                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mvj  Candidatus Methanosuratincola verstraetei
Brite
KEGG Orthology (KO) [BR:mvj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mvj03400]
    ACO0C9_01300
Enzymes [BR:mvj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACO0C9_01300
    5.6.2.6  RNA 3'-5' helicase
     ACO0C9_01300
DNA repair and recombination proteins [BR:mvj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ACO0C9_01300
SSDB
Motif
Pfam: DEAD DEAD_assoc Helicase_C WHD_Lhr ResIII AAA_25 Cas3-like_C_2 AAA_19 AAA_22 Zn_ribbon_IS1595 RAD51D_N
Other DBs
NCBI-ProteinID: XRH75730
LinkDB
Position
248587..251466
AA seq 959 aa
MDDLFSAFSKPIQRIILEKGFKGFTEPQSKAIPLIMEGKNVLVIAPTGTGKTEAAFLPVL
DRIIREGGTCGIRVLYISPLRALNRDLLDRLHWWCSRLDLKVAVRHGDTETKERGRQTMA
PPDIMITTPETLQAMLPGRNLKRHLSKVRWVIVDEVHELANDKRGVQLAVALERLREITS
VEPQVIGLSATIGSPDLVGKFLVGSERGCEIVRVSVAKDLKLDVVFPEAENSDYDLAERL
ATFPEVAARLRNLRDLIEKNRSTLIFTNTRSEAEILASRFRIWDVNAPISIHHGSLAKSS
RVEVESSLKKGELKGVVCTSSLELGIDIGNVDLVIQYNSPRQVTRLLQRVGRSGHWVGGV
SRGVIITMDSDDALESAVIVRKALAEELEEVKIIENPCDVLTHQLAGLLLDEGRMGVSDA
LSIVRRAYPFAALEERRLERVLEYMSNRRPRLALYLPEEGVFIKSRPKEALYQYYFENLS
MIPEEKHYVVIDEKTDEAIGLLDEAFVAEYGEPGVKFIVRGSPWKIIQVYKSTVYVRAED
DPTGAIPDWIGDEIPVPFEIAQEVGSIRRRAASALRQGKDYGMVIDELLKDYPISRDTLY
RALQELKEQAEGLWEIPTDDVVTVEGWEGYVIVSCAFGLMINKALSRILGYMITERTGVG
AGTSQDAYRVFVKANVSPALVAEILKGLEAEGVRKVAEVAVERTGLFRRRLIHVAKRMGI
ISKEAEISDVGSAQLVENLKGSIVYEEAMSEVFSKDLDIEGLVSVVEGIKSGRFKVRVMD
PELPLSPISRIGIRELSWKTDLVPADRLRRLLIESTKARLLNEARVAVCAECFRFVENVK
IKRFISGFRCPECGSAKIGLLDEDPNEVAQMAAERSELGKVSEKHKPMLKEAVETGELTE
EYGLQAAMAIASRSLPKPVAFTIATSRTKDLDSLVDMIIREEKNALKSRFRHRKQEAQG
NT seq 2880 nt   +upstreamnt  +downstreamnt
atggacgatcttttctcagccttctcgaaacccatccagaggattatcttggagaagggc
ttcaaaggcttcactgagccgcagagtaaggcgatcccgctaataatggaaggcaagaat
gtgcttgtcatcgcgcctactggcaccggcaagaccgaggctgcgtttttgccagtcttg
gaccgcataatcagggaggggggcacttgcgggatcagagtcctctacatatcccccctt
agggctttgaacagggacctgctcgacaggctccactggtggtgcagcaggctcgacctt
aaggttgcagtcaggcacggagacaccgagacgaaggaacgggggcggcagacgatggca
ccgccggacatcatgatcactacgcccgagacattacaggcaatgctgccagggagaaat
ctaaagagacacctgtcgaaggtgaggtgggtgatagtcgacgaggtccacgagcttgcc
aacgacaagcggggcgtccagcttgctgtggcgttggagaggcttagggagataacgtcg
gtcgagccccaagtgatcgggctctcggcaacaataggatcgcctgatctggttgggaag
ttccttgtcggatcagagagggggtgcgagatcgtccgggtttcagtcgccaaggacctg
aagctcgacgtggtttttcctgaggctgaaaactctgactacgatctggcagagaggctc
gccacctttcccgaagttgctgcaaggctaaggaatcttagggatctgattgagaagaac
aggtcgacgctcatattcaccaacacgagatccgaggcggagatcctagccagcaggttc
aggatctgggacgtcaatgccccgataagcatccaccacgggagcctggcaaagtcctcc
agggttgaggtggagtcgagcctgaagaagggggagctgaagggggtggtatgcacctcc
tcgctcgagctcgggatcgacatcggcaacgtcgatctcgtgatacagtacaactcgccc
aggcaggtgacgaggctgctccagagggtggggcgatcggggcactgggtcgggggcgtt
tcgaggggcgtgataattacgatggactcggacgatgcgctcgagtccgcagtaatagtc
aggaaggcgctggcagaggagctagaggaggtcaagatcatcgagaacccctgcgatgtg
ctcacgcaccagctcgcaggtctcctcctcgacgaggggaggatgggggtgagcgatgcc
ctctcgattgtgaggagggcatatccattcgcagcgctggaggagaggaggcttgagagg
gtgcttgagtacatgagcaacaggaggccaaggctcgcgctctatcttccggaggaaggg
gtcttcataaagtcgaggccaaaagaggcgctctaccagtactacttcgagaacctttca
atgatccccgaagagaagcactatgtggtgattgacgagaagactgacgaggcaataggg
ctcctcgacgaagccttcgttgctgagtatggggagccgggggtcaagttcatagtgagg
ggatcaccgtggaagattatccaagtatacaagagcacggtgtacgtcagggctgaggat
gacccaacgggcgcgatacccgactggataggcgacgagataccagtgccttttgagata
gcccaggaagtcggcagcataaggaggagggcggccagcgcattgagacagggcaaggat
tacggcatggtcatcgatgaattgctcaaggattacccgatctccagggataccctctac
agggcactccaagaattgaaggaacaggccgagggattgtgggagatcccaacagacgat
gtggtcacagtcgaaggctgggagggctatgtcatagtgagttgcgcttttggccttatg
ataaacaaggcgctctccaggatacttgggtacatgataacggagaggacaggcgtaggc
gcagggacatcccaagatgcatacagggtcttcgtcaaggcgaatgtgagccctgccctg
gtcgctgagatcctcaaagggctagaggcggagggggtgcggaaagtcgccgaggttgct
gtcgagaggacggggctattcaggaggaggctcatccatgtcgccaagaggatgggaata
ataagcaaggaggctgagatcagcgatgtcgggtcggcccagctcgttgagaacttgaag
gggagcatagtgtacgaggaggcaatgagcgaggtcttctcaaaggatctggacatcgaa
gggctcgtctcagttgtcgaggggatcaaatccgggaggttcaaggtcagagtcatggat
cctgagttgccgctgtccccgatctcaaggatcggcatcagggagctcagttggaagaca
gatctggtgcccgcggaccggctaaggaggcttctcattgagtctaccaaggcgaggctt
ctgaacgaggccagggtcgcagtctgcgccgagtgcttcaggttcgtcgagaatgtgaaa
ataaagaggttcatcagcgggttcaggtgcccggaatgcggttctgccaagatagggctg
ctcgacgaggatcctaacgaggtggcacagatggcagcagagaggtcagagctggggaaa
gtctctgagaagcacaagccaatgctcaaggaggcggttgagacaggggagctgaccgaa
gagtacgggctgcaggcagcgatggccatagcctcgaggagcctccctaagcccgtggca
ttcacaatagcgacttcccgcacgaaggatctcgactctctcgtggacatgataatcagg
gaagagaagaacgcgctgaagagcaggttccgacacaggaagcaggaggcccaaggctag

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