Candidatus Methanosuratincola verstraetei: ACO0C9_02655
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Entry
ACO0C9_02655 CDS
T10956
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mvj Candidatus Methanosuratincola verstraetei
Pathway
mvj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mvj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
ACO0C9_02655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvj03019
]
ACO0C9_02655
03009 Ribosome biogenesis [BR:
mvj03009
]
ACO0C9_02655
04131 Membrane trafficking [BR:
mvj04131
]
ACO0C9_02655
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mvj04147
]
ACO0C9_02655
Messenger RNA biogenesis [BR:
mvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ACO0C9_02655
Ribosome biogenesis [BR:
mvj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ACO0C9_02655
Membrane trafficking [BR:
mvj04131
]
SNARE
SNARE associated proteins
Others
ACO0C9_02655
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ACO0C9_02655
Exosome [BR:
mvj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACO0C9_02655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
AAA_2
TIP49
AAA_14
AAA_22
AAA_33
ATPase_2
RNA_helicase
Vps4_C
NPHP3_N
AAA_28
nSTAND3
ABC_tran
Mg_chelatase
AAA_18
NB-ARC
DUF815
IstB_IS21
AAA_24
AAA_lid_PRS2_C
AAA_7
NACHT
Parvo_NS1
AAA_17
Zeta_toxin
Sigma54_activat
ATPase
Rad17
TsaE
Viral_helicase1
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
XRH75983
LinkDB
All DBs
Position
485948..488134
Genome browser
AA seq
728 aa
AA seq
DB search
MEGSKEVVLRVAESKQRDVGRGKVRIDADAMKKIGVSVGDVIEIEGKRKTAAIVWPAYTE
DQGMDIIRMDGLIRKNAGVGIGEKITIRKAESKPASLVKLAPLSFTISVDSGFVSFVKRR
LADTPVVEGDNVLIPVLGQAIPFAVVSTKPSGIVMVNEETTLTILEKPAEAAKVPRVTYE
DVGGLKDAIEKVREMVELPLKHPELFKRLGIDPPKGVLLYGPPGCGKTLLAKAVANETES
YFIAINGPEIMSKFYGESEQKLREFFDEAKQHAPAIIFIDELDAIAPKREEVTGEVEKRV
VAQLLALLDGLETRGDVIVIGATNRQNAIDPALRRPGRFDREIEIGVPDVKGRYEILQIH
TRNMPLAKDVDLNRLASLTHGFVGADLAALAREAAMKALRRYLPEIDIQQERVPQEFLEK
LEITMEDFMNAFREVTPTELREVYVEIPNVRWSDIGGLDSIKQELIEAIEWPLKYPERFK
RLGIKPPKGVLLYGPPGCGKTLLAKAVANESEANFITVKGPEIFSKWVGESERAIREVFR
KARTAAPVVIFFDEIDSIAPMRGGGSSDSMVTERVISQLLTEMDGLVGLFNVVIIGATNR
PDIIDPALLRPGRFDKLLFVPEPDNETRMQIFKIHTRDMPLAKDVDLDRLVAMTMNYAGS
DIEALCREAGMMALREDPNAKEVQMKHFLKAKEKIRPTISEEMLKYYKAWEERSKQSLRG
KSPLINFI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggagggttctaaagaggtcgtactcagggtagctgaatcgaagcagagggacgtgggc
aggggcaaggtcaggatcgacgcggacgcgatgaagaagataggcgtcagcgtcggcgac
gtgatagagatagaggggaagaggaagacggccgcgatagtatggcccgcctacaccgag
gatcaggggatggacataataaggatggacggcctcatccgcaagaatgcaggggtcggg
ataggggagaagatcacaatcaggaaggccgagtccaagcctgcaagcctcgtcaagctc
gcacctctctcgttcacgataagcgtggattcaggtttcgtgagcttcgtgaagaggagg
ctcgccgacactccggtggtggaaggcgacaacgtcctgatacctgttcttgggcaggcg
atcccgttcgcagtggtctcgaccaagccctccgggatagtcatggtgaacgaggagacc
accctgacgatccttgagaagcccgcggaggctgccaaagtcccgcgcgtcacgtatgag
gacgtcggagggctcaaagatgccatcgagaaggtaagggagatggtggagctcccgctg
aagcacccggagcttttcaagaggctcgggatcgatccgccgaagggggtcctgctctac
ggaccgcccgggtgcggcaagacgctcctcgcgaaggcagtggcaaatgagactgagtcg
tacttcatcgccatcaacggccccgagatcatgagcaagttctacggcgagtcggagcag
aagctcagggagttcttcgacgaggcgaagcagcacgcgcccgcgatcatattcatagac
gagctcgatgcgatagccccaaagagggaggaagtcacaggggaggtcgagaagagggtc
gtcgcccagctgcttgccctgctagacggcctagagacgcgcggcgatgtgatcgtgatc
ggggctaccaacaggcagaatgcgatagaccctgccctgaggagacccggcaggttcgac
cgcgagatcgagatcggggtgccagatgtcaagggcaggtacgagatcctgcagatacac
accaggaatatgccgctggcgaaggatgtggaccttaacaggctcgcgagcctcacccac
ggcttcgtcggggctgatctggcagcgctcgcaagggaggccgcgatgaaggcgctcagg
aggtacctgccggagatagacatccagcaggagagggttccgcaggagttcctcgagaag
cttgagatcacgatggaggacttcatgaacgcgttcagggaggtcacaccgaccgagctc
agggaggtctatgtcgagataccaaatgtcaggtggagcgacataggagggctcgactcg
ataaagcaggagctgatagaggcgatcgagtggccgctgaaataccctgaaaggttcaag
aggcttggcataaagccgccgaagggggtcctgctctacggaccgcccgggtgcggcaag
acgctcctcgcgaaggcagtggcaaatgagagcgaggccaacttcatcacggtcaagggt
ccagagatcttcagcaagtgggtcggagagtccgagcgtgcgataagggaggtgttcagg
aaggcaaggacggcggccccggtagtcatattcttcgatgaaatcgactcgatcgctccc
atgaggggtggcggctcgagcgactcgatggtcacggagagggtcataagccagctcctg
actgagatggatggcctggtagggctcttcaatgtcgtcatcataggagccacaaacagg
ccagacatcatcgacccggcgctgctgcgccccgggagatttgacaagctgctgtttgtc
ccagagccggacaacgagacgaggatgcagatcttcaagatacacacaagggacatgccg
ctggcgaaggatgtggaccttgacaggctggtggcgatgacgatgaactacgcaggatcc
gacatagaggcgctatgcagggaagccggcatgatggcgctgagggaggacccgaatgct
aaggaggtccagatgaagcacttcctcaaggctaaggagaaaatacgaccaaccataagc
gaagagatgctcaagtactacaaggcatgggaggagaggagcaagcagtccctgaggggc
aagtcgccgctcatcaatttcatctga
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