Candidatus Methanosuratincola verstraetei: ACO0C9_02990
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Entry
ACO0C9_02990 CDS
T10956
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mvj Candidatus Methanosuratincola verstraetei
Pathway
mvj03410
Base excision repair
mvj03430
Mismatch repair
mvj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACO0C9_02990
03430 Mismatch repair
ACO0C9_02990
03440 Homologous recombination
ACO0C9_02990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvj03400
]
ACO0C9_02990
DNA repair and recombination proteins [BR:
mvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACO0C9_02990
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACO0C9_02990
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACO0C9_02990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
XRH76044
LinkDB
All DBs
Position
complement(539416..540882)
Genome browser
AA seq
488 aa
AA seq
DB search
MLSLHKDLKGLEQRSLEIAGEISSIPAGEPVLVVCHLDADGITSGSIIASALLRSGAAPH
IRVVKQLDEAAISEILPIKAKNVIFTDMGSGQRKLLERLGSYERRIFIIDHHQPTPKEGN
DSGAVGGIMEINPHLFGFDGSNEISASGTAFLVAKKMSSENASLAPLAIVGALGDMQDKG
DRGSLIGLNASIAEDAQRSGLIAVSKGLKLYGFESRPLVKSMEYTLNPYLPGLSGDEGAC
FKFLKNAGIEPRKQDGSWRSISDLSNEEIRQVTSALIKYLISQGLSSQDAESVVGVLYTI
KSEAADSPMRDAREYASSVNACGRLGKYGLGVALCLGDRAGALTELRELLTEYRKKISGY
LRWLENNPSSLRVMNSIQVILAGSNIDDRMIGTIVSIAFSMKPFTRSKPIFGLSNAEGVV
KVSARGTTDLVRRGLNLGSAIREASEQVGGAGGGHNIAAGGQIPVGKEEAFLTLVDKIIA
KMIGGVKL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttgctgtccctccataaggacctaaaagggctggaacagaggtctctcgagattgcaggg
gagatttcttcgatcccagccggagagcccgtccttgtggtgtgccacctcgacgctgac
gggataacctccggaagcattatcgcctctgcacttttgaggtctggggccgccccccac
ataagggtggtcaagcagctggacgaggctgcgatttccgagatcctcccgatcaaggcc
aaaaacgtcatattcaccgacatgggcagtggacagaggaagctgctcgagaggctcggc
tcatacgagaggcgcatcttcatcatcgaccaccaccagcccactcctaaggaaggcaat
gattcgggggcggttggcggcataatggagatcaatccccacttatttggctttgacggg
tcgaatgagatatccgcatctggcactgctttcctggttgccaagaagatgtcttctgag
aatgcctcgcttgcgccattggcgattgttggggcactcggggacatgcaggacaaggga
gatcgcggatctttgataggactcaacgcctcaatagcggaggatgcccagagatctggg
ctaatcgcagtttcgaagggtctaaagctatatggcttcgagtcaaggcctctcgtcaag
tctatggaatacacgctcaacccctatctgcccgggctgagcggggacgagggggcctgc
ttcaagttcctgaagaatgcagggatcgagccccgaaagcaggacggcagctggagatcc
atctcggatctgtctaatgaggagatccggcaggtcacaagcgctctgataaaatacctt
atctcccaagggctctcgagccaggatgccgaaagcgtcgtgggcgtcctgtatactata
aaatccgaggctgcagactccccaatgagggacgccagggagtatgcctcatcggtcaat
gcttgcgggcgccttgggaaatatggcctgggtgtggcgctatgccttggggaccgggca
ggcgccctcacggagctcagggagcttctcaccgagtacaggaagaagatctcgggctac
ctcaggtggctcgaaaacaacccgtcgtccctaagagtgatgaacagcatacaggtgatt
cttgcggggagcaatattgatgaccggatgatcgggacaatagtctcgatcgcattttcc
atgaaacctttcacgaggagcaagccaatttttggcctctcgaacgcagagggggtcgtc
aaggtctctgcaagagggacaactgatctggtgcggagggggctcaatctcggatccgcg
ataagggaagcctccgagcaggtgggaggggcagggggagggcacaatatcgcagccggc
gggcagatccctgtcggcaaggaggaggcatttttaacgttagtggacaagataattgca
aagatgatagggggcgtcaagctttga
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integrated database retrieval system
