Candidatus Methanosuratincola verstraetei: ACO0C9_03170
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Entry
ACO0C9_03170 CDS
T10956
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mvj Candidatus Methanosuratincola verstraetei
Brite
KEGG Orthology (KO) [BR:
mvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvj03016
]
ACO0C9_03170
Enzymes [BR:
mvj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACO0C9_03170
Transfer RNA biogenesis [BR:
mvj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACO0C9_03170
Prokaryotic type
ACO0C9_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
XRH76073
LinkDB
All DBs
Position
complement(564365..565339)
Genome browser
AA seq
324 aa
AA seq
DB search
MNGEFLVKAEEPSGPSHGWAPRERPIDEYLATGVINLDKPPGPSSHEVVAWVKRLLSLNR
AGHGGTLDPKVSGVLPITLERATRIISFVMRSGKEYVCIMELHGDVARQRLDDAISEFIG
PIYQLPPVRSAVKRALRVRNIYSIDILEKEGKYVLMRVSCEAGTYIRKLCHDLGEVLGVG
AHMRELRRTRAGPFREDEGLHTLHELLDAITLWKERGDEKALRSVVSPIEEFIGDFPKAV
IRDSAVDAICHGASLAAPGLLRISKGVKPGDTICIMTGKGELVGIAKARLSSEECIRSES
GIIADTERIVMEPGTYPKGWTSGE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgaacggtgaatttcttgtaaaggccgaggagccttcgggaccatcgcacgggtgggca
cccagggagaggccaattgacgagtaccttgcaacgggagtgattaacctggacaagccc
ccaggtccgagcagccacgaggttgtggcttgggtcaagcggctcctctcgctcaaccgg
gctgggcatggcggaaccctggatccaaaagtcagcggcgtgctgccgatcaccctcgag
agggcaaccaggataatctcttttgtaatgcggtccgggaaggagtatgtctgcataatg
gagctccacggggatgttgcgaggcaacgcctcgatgatgccataagcgaatttattggc
ccaatataccaattgccgcccgtgcgttcggcagtgaagcgcgccctaagggtcaggaac
atctattcgatcgacatcctggagaaggaaggcaaatacgtcctgatgagggtgagctgc
gaggctggtacctacatcaggaagctctgccacgatctaggcgaggtcttgggcgtgggc
gcgcacatgcgcgagctccggaggacgcgggcaggaccattcagggaggatgaggggttg
cacacgctccatgagctactcgatgcgatcacgctctggaaagagaggggggatgaaaaa
gccctcagatcggtcgtctcgccgatcgaggaattcataggcgacttccccaaggcagtc
atcagggactctgcagttgacgccatatgccatggggcgagccttgcggctcccggtcta
ctcaggataagcaagggcgtcaagcccggagacacgatttgcataatgacaggtaagggc
gagctcgttgggattgcaaaggcaaggctcagcagcgaggagtgcataagatccgaaagc
gggattatcgccgacaccgaaaggatagtcatggagccggggacttacccgaagggatgg
acatcgggcgagtga
DBGET
integrated database retrieval system
