Candidatus Methanosuratincola verstraetei: ACO0C9_03420
Help
Entry
ACO0C9_03420 CDS
T10956
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mvj Candidatus Methanosuratincola verstraetei
Pathway
mvj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mvj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACO0C9_03420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvj03021
]
ACO0C9_03420
Enzymes [BR:
mvj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACO0C9_03420
Transcription machinery [BR:
mvj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
ACO0C9_03420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
CpXC
Motif
Other DBs
NCBI-ProteinID:
XRH76118
LinkDB
All DBs
Position
complement(598186..600843)
Genome browser
AA seq
885 aa
AA seq
DB search
MSFYELIKSIKSIKFGVLSPEEIRKMSVVNIVTADTYDEDGIPIEAGLMDRRLGTIEPGQ
KCQTCGNRVGQCPGHFGHIELARPVVHPGFAKLVYNLLKSTCWNCGRILLTKEEVEKYAL
LMERYQRKWPQLRLRLAERVIRRASKNTECPHCGEAQYKLKFEKPTTYYEEHKEGTVKLA
PNEIRSRLERITDSDVKLMGLDPRIARPEWMVLTVLPVPPSAVRPSITLESGIRSEDDLT
HKLVDIIRINERLKDNVDAGAPQLIIEDLWELLQYHVTTYFDNETSGIPPARHRSGRPLR
TLAQRLKGKEGRFRSNLSGKRVDFSARTVISPDPIISINEVGVPIDVAKLLTIPERINPY
NMDQVKRLIENGPDVHPGANYIIRPDGRRIDLRFPKDRKSIADAVEIGYIVERHLKDGDI
VLFNRQPSLHRMSIMAHKVRVLPYKTFRLNLCVCPPYNADFDGDEMNLHVPQSEEARAEA
GVLMLVQEQILSPRYGGPIMGGIQDYISGAYMLTRKGTLLTREEASQLLARAGYTGELPP
PEISEPKELWTGKQLASLFFPKGFNYSLKSNVCLKCPTCKKEECENDAYVVIRDGKLIKG
VIDKKSIGAGQPESVLHRLIKDYGTDAGRDYIDRAFKLFLAYIDSRGLTIGLDDEELPAE
AKKKVLEVIRQAEAKVSELIDIYNQGLLERLAGRTLEETLETKIMQELEEARELAGEIAS
QYLKDSNTALLMARTGARGSLMNLAHMVACVGQQSVRGERIMRGYMNRTLPHFKQGDLGA
EAHGFVYSSYKDKLNPIEFFFHAMGGREGLVDTAVRTSQSGYMQRRLINALQDVRVEYDL
TVRGTDGSIIQFKYGEDGVDPAKSDHGKAVNVEKIIERVVKAGGS
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctacgagctgatcaaatcgatcaagtcaatcaagttcggcgtgctttcgcct
gaagagataaggaagatgtcggtagtgaacatagtgactgccgacacctacgacgaggac
ggcatacccatcgaggccggcctcatggacaggaggctcggcacaatcgagcccgggcag
aaatgccagacctgcgggaaccgggtcgggcagtgccccggtcacttcggccacatcgag
ctggcccgccccgtggtccatccgggcttcgccaagctcgtctacaacctgctcaagtcc
acttgctggaactgcggcaggatactgctcaccaaggaagaggtcgaaaagtacgccctg
ctgatggagaggtaccagaggaagtggcctcagctgaggctcaggctcgccgagagggtc
atccggagggcctccaagaacacggagtgcccccactgcggggaggcccagtacaagctc
aagttcgagaagccgaccacctactacgaggagcacaaggagggcaccgtgaagctagcc
cccaacgagatcaggtcgaggctcgagaggataaccgactcggacgtgaagctcatgggc
cttgatccgcgcatagccaggccagagtggatggtgctcacagtcttgcccgttccccca
tcggcggtgcgcccatcgatcacgctcgagtcaggcatcaggtctgaggacgacctgacg
cacaagctcgtagacatcataaggataaacgagcgcctaaaggacaatgtcgatgcaggc
gccccgcagctcatcatcgaggacctctgggagctgctccagtaccatgtgacgacatac
ttcgacaacgagacctcggggatcccgccggcgcgccatcgatctggaaggccgctgagg
actttggctcagaggctcaagggcaaggaggggaggttcaggtcgaacctttcgggcaag
cgcgtcgacttctccgccaggacggtgatatccccggacccaataatcagcatcaacgag
gtgggcgttccaatagatgtggcgaagctcctgacgatacctgaaaggataaacccatac
aacatggatcaggtgaagcgcctcatcgagaacggcccggacgtccaccccggcgcgaac
tacataatcagaccagacggaaggaggatcgacctcaggttcccgaaggacaggaagtcg
atagcggatgccgtcgagatcggctacatcgtagagcgccacctgaaggatggcgacatc
gtcctcttcaacaggcagccgtcgctccacaggatgtccataatggcgcacaaggtcagg
gtcctgccgtacaagaccttcaggctcaacctttgcgtctgcccgccctacaacgccgac
tttgacggggacgagatgaacctgcatgtcccccagagcgaggaggctagggctgaggca
ggcgtcctgatgctcgtccaggagcagatactctccccgaggtacggtggccctatcatg
ggcgggatacaggactatatctctggcgcgtacatgctcactaggaaggggacgttgctc
accagggaagaggcctcgcagcttctcgctagggcaggctacaccggagagctccccccg
cccgagataagcgagccgaaggagctctggaccgggaagcagctggcgagcctcttcttc
ccgaaggggttcaactactcgctcaagtccaatgtctgcctcaaatgcccgacctgcaag
aaggaggagtgcgagaacgatgcctacgtcgtgataagggacgggaagctcataaaagga
gtcattgacaagaagtcgatcggcgcaggtcagcccgagagcgtcctccacaggctaatc
aaggactatggtactgacgcagggagggactacatagacagggcattcaagctcttcctg
gcttacatcgacagccgcgggctgacgattggcctcgacgacgaggagctccctgcagag
gcaaagaagaaggttcttgaggtgatcaggcaggctgaggcgaaggtatccgagctgatc
gacatctacaaccaggggctcctggagcgactcgcaggacggacgctcgaggagacgctt
gagacgaagatcatgcaggagctcgaggaggccagggagcttgcaggggagattgcaagc
cagtacctgaaggattccaacacagcgctcctcatggccaggactggtgcgaggggtagc
ctgatgaacctcgcgcacatggtcgcgtgcgttgggcagcagtcggtccgaggcgagagg
atcatgaggggatacatgaacaggaccctcccccacttcaagcagggcgaccttggggcc
gaggcacacggcttcgtctacagcagctacaaggacaagctcaacccgatcgaattcttc
ttccacgcgatgggaggtagggaaggtctggtcgacactgccgtaaggacaagccagagc
ggctacatgcagcggaggctgatcaacgccctgcaggacgtgcgtgtcgagtacgacctg
acggtgaggggcacggacgggtcgatcatccaattcaagtacggtgaggacggcgttgac
ccggcaaagagcgaccatggcaaggcagtgaacgtggagaagatcattgagagggtcgtg
aaggcaggaggcagctga
DBGET
integrated database retrieval system
