Candidatus Methanosuratincola verstraetei: ACO0C9_03425
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Entry
ACO0C9_03425 CDS
T10956
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
mvj Candidatus Methanosuratincola verstraetei
Pathway
mvj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mvj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACO0C9_03425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvj03021
]
ACO0C9_03425
Enzymes [BR:
mvj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACO0C9_03425
Transcription machinery [BR:
mvj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
ACO0C9_03425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Auto_anti-p27
Zf_2nd_IFT121
Motif
Other DBs
NCBI-ProteinID:
XRH76311
LinkDB
All DBs
Position
complement(600846..604160)
Genome browser
AA seq
1104 aa
AA seq
DB search
MDDRWSLIEAFFREKGLVRQHLDSYDDFVRTKLQEVVDEQGVIETDLPGFKIKLGKITVG
KPAIHEADGSEKEIFPMEARQRNLTYSASLHLKVTPIEDGFEDEEVSVFIGKLPIMVKSS
FCNLSRLSPQELIANGEDPADPGGYFIINGSERVVVIQEDLAVNRILVDVMEGASPVTHV
AKVFSATSGFRVPFTLERMKDATFQVSFPSIPGRISLAILMKALGASSDKEIVEFVSGDP
AIQRAMIPTLEGAIEINTVEDALDYIGNRIAIGQTKEYRIERAMQVLDKYLLPHLGLTPA
DRKKKALYLGQMAEKLIELSLGMRSPDDKDHYANKRLKLAGDLLAGLFRVAFKSFCRDMK
YQLERAKSRSRKVSIQTLVRADVITERLRHALATGNWVGGKAGVSQLLDRTNYLSTIGHL
RRIISPLSRSQPHFEARDLHSTQWGRLCPSETPEGPNCGLVKNLALMAFISVGIDERPVE
ELLYELNTEPVENARKQGITGAKVILNGRLIGIHQKPELLVADLRRLRRRGKLHHEVNVA
HYRYGSINEVYVNCDAGRVRRPLLIVDNGVPRLTMDHIQKLVSGEWTWNDLITQGIVEYL
DAEEEENSYIALDSKHLDRERTHMEIVPSTILGISASMIPYLEANQSPRNTYGSAMVKQS
LGFYAANFSKRLDTRGHLLHYPQKPLVNTRPAKMLALDRRPAGQNFVVAILSYSGYNIED
ALIMNKSSVERGLGRSSFFRCYETEERRYPGGQEDKVEIPNPDVRGYRTAESYRFLGDDG
IIEPESTISGGDVLIGKTSPPRFLEEYREFETTGPMRRETSVSMRAGEDGVVDLVIVTET
SDGNKLIKIRVRNERVPELGDKFASRHGQKGVVGMLVPQYDMPYTEDGVVPDLIINPHAI
PSRMTLGQLLELLGGKASAVSGEQIDGTAFCGTDERYMRELLSKSGFKSTGKEIMYDGRT
GRVLEAEVFIGIAYYLKLHHMVADKMHARARGPVQILTRQPTEGRAREGGLRFGEMERDC
LIGHGAAMLLKERLLDESDRSSVHICEDCGLIAYYDRVKDRYVCPVCGDKAKTTTVVMSY
AFKLLLQELMSLGIAPRLKLEERV
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatggtccctgatagaggctttcttcagggaaaagggtctggtcaggcag
cacctagactcgtatgatgacttcgtgaggacaaagctgcaggaggttgttgatgagcag
ggggtgatcgagactgatctccctggcttcaagatcaagctgggaaagatcacggtgggc
aagccggccatacacgaggccgacggatccgagaaggagatattcccgatggaggcccgc
cagaggaacctcacctactccgcctcgctgcacctcaaggtgacgccgatcgaggacggc
ttcgaggacgaggaggtctcagtcttcatcggtaagctgccgatcatggtcaagtcttcg
ttctgcaacctctcgcggctctccccacaggagctgatcgcgaacggagaggatcccgcg
gatccaggaggatacttcataatcaacggatccgagagggtcgtggtgatccaggaggac
ctggcagtcaaccgtatccttgtcgacgtgatggagggcgcatctccagtaacccatgta
gcaaaggtcttctcggctacctcgggcttcagggtccctttcacgctcgagaggatgaag
gacgcaacattccaggtctccttcccgtccatcccagggaggatctcgctcgcaatactg
atgaaggctctcggggcgtcctcggacaaggagattgtcgagttcgtctcgggggaccca
gccatccagcgggccatgataccgaccctcgagggcgcaatcgagatcaacacagttgag
gacgcgctggactacataggcaacaggatcgcgatagggcagaccaaggagtacaggatc
gagcgcgcgatgcaggtcctcgacaagtacctgctcccgcaccttgggcttacccccgca
gaccggaagaagaaggctctgtacctcggacagatggccgagaagctgatcgagctatcc
cttggcatgaggtcgcctgatgacaaggaccactatgccaacaagaggctaaagctcgcc
ggggatctgctcgcaggcctcttcagggtcgccttcaagagcttctgccgcgacatgaag
taccagctggagcgggcgaagagcaggagccggaaggtctcgatccagacgcttgtaagg
gccgacgtaatcaccgagaggctgaggcacgcgctggcgaccgggaactgggtaggagga
aaggcaggcgtgagccagctcctcgacaggaccaactacctctcgacgatcggacacctg
aggaggataatctcgccgctgagcaggtctcagccccacttcgaggcacgcgaccttcat
tcgacccaatggggaaggctctgcccgagcgagacccccgaggggccgaactgcgggctg
gtcaagaacctcgcgctgatggcattcatatccgttggcatcgacgagcgcccggtcgag
gagctcctgtatgagctcaacaccgagcccgtggagaatgcccggaagcaagggatcaca
ggggccaaggtaattctcaacggcaggctgatcgggattcaccagaagcccgagctcctc
gtcgctgacttgaggaggctcaggcggaggggcaagctccaccacgaggtgaatgtggcg
cactacaggtacggtagcattaacgaggtctatgtcaactgcgacgcgggcagggtgagg
cgcccgctcctcattgttgacaacggcgtcccgcgcctgacgatggatcacatccagaaa
ctggtctctggcgagtggacctggaacgacctgatcacccagggcatagtcgagtacctc
gacgccgaagaggaggagaattcctacattgccctcgactcgaagcacctggacagggaa
cggacccacatggagatcgtcccgtccacgatcttggggatcagcgcctcgatgatacca
tacctcgaggctaaccagtcccccaggaacacctacggatcggcgatggtcaagcagtcg
ctgggcttctacgccgcaaacttctccaagcggctcgacacgaggggccaccttctccac
tacccgcagaagccgttggtcaacacccggccggcgaaaatgctggctctggacaggcgc
cccgcgggccagaactttgtggtcgcgatactctcctattcgggctacaacatagaggat
gccctgataatgaacaagtcatcggtcgagaggggcctcggcaggtcttcgttcttcagg
tgctacgagaccgaggagaggaggtacccgggtggacaggaggacaaggtggagatcccg
aacccggacgtgaggggctacaggacagccgagtcctacaggttcctcggagacgacggc
ataattgagcccgagtctacgataagcggcggcgacgtcctgataggcaagacaagcccg
ccaaggttcctcgaggagtacagggagttcgagacgacgggccccatgaggagggagacc
tccgtctccatgagggccggcgaggatggcgtcgtagacctcgtcatcgttacagagaca
tccgacggcaacaagctgatcaagatcagggtcaggaatgagcgtgtacctgagcttggc
gacaagttcgcttccaggcacgggcagaagggcgtcgtcgggatgctagtcccccagtac
gacatgccgtacaccgaggacggcgtggtcccggacctgataatcaacccacacgcaatc
ccgtcgcgaatgaccttggggcagctgctggagctactcgggggcaaggcctccgcggtc
tcgggtgagcagattgacggcactgcattctgcgggacggatgagcgctacatgagggag
ctgcttagcaagagcgggttcaaatccacaggcaaggagataatgtacgacggccggacc
ggaagggtgctggaggcagaggtcttcatcggcatcgcctattacctcaagctccaccac
atggttgcagacaagatgcacgcacgcgcgaggggtccggtacagatactcacgaggcag
cccaccgagggcagggcgagggaaggaggtctcaggttcggggagatggagcgcgactgc
ctcataggtcacggcgcagccatgctcttgaaggagaggctcctcgacgagtccgacagg
agctcggtgcacatctgcgaggactgcggactcatagcctactacgacagggtaaaagac
aggtacgtctgcccagtctgcggcgataaggcgaagacgaccacagtggtcatgtcgtac
gccttcaagctgctgctgcaggagctcatgagcctcgggatagccccaaggcttaaactg
gaggagagggtctga
DBGET
integrated database retrieval system
